Query= MSMg01no054_e04.b1 MSMg01no054_e04.b1 CHROMAT_FILE:
MSMg01no054_e04.b1 PHD_FILE: MSMg01no054_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:24 2005
(423 letters)
>mm_chr10_122421695_122422519
Length = 825
Score = 775 bits (401), Expect = 0.0
Identities = 419/425 (98%), Gaps = 2/425 (0%)
Strand = Plus / Minus
Query: 1 taacgttttaggggtctgggtttctataggaccgcttcgtttaagagttttaaaatgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taacgttttaggggtctgggtttctataggaccgcttcgtttaagagttttaaaatgtaa 566
Query: 61 gcctaaagcaaagtagagttttggttttaattgtttataactccttaaacagggttgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcctaaagcaaagtagagttttggttttaattgtttataactccttaaacagggttgact 506
Query: 121 ttatagttgaatgcactattcgggtc-ttttttttttaatgtataaagctaaataaatta 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 ttatagttgaatgcactattcgggtctttttttttttaatgtataaagctaaataaatta 446
Query: 180 tttttactgagtgctgtgtttttgttttttcta-tttttttttcttttggtttaactttg 238
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 tttttactgagtgctgtgtttttgttttttctattttttttttcttttggtttaactttg 386
Query: 239 gaagctcgaatgttcatgctggtgtgggggagggccagccttagacttttatgttactat 298
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagctcgaatggccatgctggtgtgggggagggccagccttagacttttatgttactat 326
Query: 299 gcttctctatgtctgcattttattaaagacgagtagatcagagttggaaccacgacttcc 358
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 gcttctctatgtctgcattttattaaagacgagtagatcagagttggaagtacgacttcc 266
Query: 359 gagagagccgagtattaatgtctaatgacatttgattcttaacctctattagtaaagtac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagagagccgagtattaatgtctaatgacatttgattcttaacctctattagtaaagtac 206
Query: 419 aggtt 423
|||||
Sbjct: 205 aggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 825
Length adjustment: 9
Effective length of query: 414
Effective length of database: 816
Effective search space: 337824
Effective search space used: 337824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_e04.g1 MSMg01no054_e04.g1 CHROMAT_FILE:
MSMg01no054_e04.g1 PHD_FILE: MSMg01no054_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:24 2005
(286 letters)
>mm_chr10_122291282_122291966
Length = 685
Score = 514 bits (266), Expect = e-150
Identities = 281/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 agcgctgtttgacaggccagtgggcagagaagaagttgagacattgagtgtgtgtggctg 60
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 agcgctgtttgagaggccagtgggcagagaagaagtggagacattgagtgtgtgtggctg 260
Query: 61 ttaatgtactatacagctcagtagaagaggacactctccggtgggccctggactaacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatgtactatacagctcagtagaagaggacactctccggtgggccctggactaacaca 320
Query: 121 gtgttgagttggctttgggttcattttgggggctttgtgcactctcttttgagtgtgggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 321 gtgttgagttggctttgggttcattttgggggctttgtgcactctcttttgaacgtgg-t 379
Query: 181 tttatactgtggcagagagtatcagtggagagagaagttgacaatccaggaatggaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttatactgtggcagagagtatcagtggagagagaagttgacaatccaggaatggaaaca 439
Query: 241 gtgatgttgggagggttctgagttgatgcttgggcagaccagccac 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgatgttgggagggttctgagttgatgcttgggcagaccagccac 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
