Query= MSMg01no054_j13.b1 MSMg01no054_j13.b1 CHROMAT_FILE:
MSMg01no054_j13.b1 PHD_FILE: MSMg01no054_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:49 2005
(204 letters)
>mm_chr10_110244491_110245093
Length = 603
Score = 339 bits (175), Expect = 1e-97
Identities = 195/203 (96%), Gaps = 5/203 (2%)
Strand = Plus / Plus
Query: 4 ggaattcagacta--tcctgcacattccactttaataacaaaaactccctctctaatgag 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagactagtt--tgcacattccactttaataacaaaaactccctctctaatgag 261
Query: 62 ttccatggaaggctctggacatattctttcttcttcccctgcttgactagaagtggaatg 121
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 ttccatggaa-gctctggacatattctttcttcttcccttgcttgactagaagtggaatg 320
Query: 122 aagagccctggtgctggcacggcctgactggctggtagtttgttgttgctgttgtggttg 181
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aagagccctggtgttggcacggcctgagtggctggtagtttgttgttgctgttgtggttg 380
Query: 182 tggttgtggttttgttttgtttt 204
|||||||||||||||||||||||
Sbjct: 381 tggttgtggttttgttttgtttt 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 603
Length adjustment: 8
Effective length of query: 196
Effective length of database: 595
Effective search space: 116620
Effective search space used: 116620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no054_j13.g1 MSMg01no054_j13.g1 CHROMAT_FILE:
MSMg01no054_j13.g1 PHD_FILE: MSMg01no054_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:49 2005
(367 letters)
>mm_chr10_110372770_110373536
Length = 767
Score = 663 bits (343), Expect = 0.0
Identities = 361/367 (98%)
Strand = Plus / Minus
Query: 1 cttagacctgatcgcagaggaagaccagaccagggcccggctggaaggaacagacagggt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 567 cttagacctgatcgcagaggaagaccagaccagggcccggctggaagggacagacagggt 508
Query: 61 taccactgcacatagggcgtgcacacagagcttgcttattgctgggaaaggtggcaacag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 507 taccactgcacatagggcgtgcacacagagcttgcttattgctgggaaaggtggggacag 448
Query: 121 ggcagaaagagcatccatgatttcccagttctggctacaaacacagcctttgggggtctt 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggcagaaagagcatccgtgatttcccagttctggctacaaacacagcctttgggggtctt 388
Query: 181 gtgaatttagttttcattgatgggaagatttagaggtaatgtatattgtgaaacatttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgaatttagttttcattgatgggaagatttagaggtaatgtatattgtgaaacatttgg 328
Query: 241 aatccctttggaatcagggatacacttaaaagagaatataagaagtacagtgcatttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 327 aatccctttggaatcagggatacacttaaaagagaatataagaagtacagtacatttcaa 268
Query: 301 cagtgtccaccaggggtaggttggctgtttctggaccacacagggagagcctgtttcaaa 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 267 cagtgtccaccaggggtaggttggctgtttctggaccatacagggagagcctgtttcaaa 208
Query: 361 accaggg 367
|||||||
Sbjct: 207 accaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
