NNNNNTTTTNTTTNNNNNNNNNNNNNNNNNNNGTTTTCTTTCATTGGCCC
CGGAGACTANNANGAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXNNGNGGNAATNTTATAGTCCATTATAATTGAGNATTATTTN
TNTNNNAGTTGTTNTGTAAGTAAATGAATTTTATCCTATATAATCTAATG
TCACAAAAGCATATGGGTGCTAGATTCTCTTGTATTGCTTCATTTTCAAA
GTGATGTTAGCATTAAGAAGCCCTGCTTGATAACAACATGATCCATGTCA
CAGTAAGGATCCGTGGCTGACCTTTACCACCACTCACTTTTGAGATATTC
CATGACCCTAAGGATTTATGTTTATTAATTTTTTTTATATAAATTGCCAT
TTTATTTCAACACAATATGTTGTAATTCACTTTCTTATGTAATGCACACA
AAGGTACCAAATGGATAAAGAAAAATTTCTAAGGATGATTCAACAAATAA
TAAATGAAGCAGGTCAACAGGAAAAGCAGGTCTTTTTAAAGCATATAAAA
AAATAAAAAAAAAAAAAAAACTCAGTGCTCTCATTAATTCCTCAAAGTTG
ATTTAATTCTTACTGGTTCTGTAAAGTTAAGTCAAACACAGACAAATGAT
AAAGGGCACATTCCTCCCACATTATGCATCTTTGAGCTTTTTCCTCAGGT
TTTCCATTGTTCTATACTTGGTTTACTCTTGAATATTGTGAATGAAGTAT
GGATATCCTGGTCCCACG

TGGCGGCCGCCTGTTCCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXACATGAGTAGTAGAGGAGAAATATAGAAAAGGTATGCAGTACAG
AAGTTGATAATGTCCTTGTCTCAGAAGAGGCTTGTCACAACATCAGGTGT
CAGGAGTGTAGCCCAGGTAAGTTCATCAGTTACTCTTTATAAAAAAACCA
CTGGAAGAAAATGAGACTGAAAAAAATTAAGCATTTATTCTGTTTTATAT
TAAGCTTGAAATGTATCCTTGTTAGTCACACTAAGGAAACCTTTGCAGAT
GTATTAGGGAGACACATTTCATTTTACTCAGTTCTAAAGCAAAACTCCAG
GCAAGAGTGTCTACCTAATGTTCCCAACTGATAAGCCTCATAGGTGAATG
CTCATCCATCTTCGACTGCTCCAGTGTCTCCACTCTTACAGGATGGTGTC
CTACAATGGGAAAGCATGGGGCAAAGAGACACAGTACAGAACACTAGTGT
TAGCTCCAGTGGTCATGCAGTGGTTTTGGAACAGATCCCTGGGTCCATGC
AGACATCTTCACTGCCCTTCTGTGTAGTCTTTTGGGATCAGCACATCTAA
GCAGAGGGCCAGTTAAGATCCGTGGTCCTTTATATTCATGACAAACTGGG
TGAGAAATCAGCATTGTGAATGGAAACTTAGACTGGN

Query= MSMg01no054_m09.b1 MSMg01no054_m09.b1 CHROMAT_FILE:
MSMg01no054_m09.b1 PHD_FILE: MSMg01no054_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:02 2005
         (191 letters)



>mm_chr10_34571438_34572028
          Length = 591

 Score =  362 bits (187), Expect = e-104
 Identities = 190/191 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atataatctaatgtcacaaaagcatatgggtgctagattctcttgtattgcttcattttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atataatctaatgtcacaaaagcatatgggtgctagattctcttgtattgcttcattttc 332

                                                                       
Query: 61  aaagtgatgttagcattaagaagccctgcttgataacaacatgatccatgtcacagtaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aaagtgatgttagcattaagaagccctgcttgataacaacatgatccatgtcacagtaag 272

                                                                       
Query: 121 gatccgtggctgacctttaccaccactcacttttgagatattccatgaccctaaggattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 271 gatccgtggctgacctttaccaccactcacttttgagatattccatgaccctatggattt 212

                      
Query: 181 atgtttattaa 191
           |||||||||||
Sbjct: 211 atgtttattaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space:   106689
Effective search space used:   106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no054_m09.g1 MSMg01no054_m09.g1 CHROMAT_FILE:
MSMg01no054_m09.g1 PHD_FILE: MSMg01no054_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:02 2005
         (544 letters)



>mm_chr10_34411499_34412442
          Length = 944

 Score =  990 bits (512), Expect = 0.0
 Identities = 536/544 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acatgagtagtagaggagaaatatagaaaaggtatgcagtacagaagttgataatgtcct 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 acatgagtagtagaggagacatatagaaaaggtatgcagtacagaagttgacaatgtcct 260

                                                                       
Query: 61  tgtctcagaagaggcttgtcacaacatcaggtgtcaggagtgtagcccaggtaagttcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtctcagaagaggcttgtcacaacatcaggtgtcaggagtgtagcccaggtaagttcat 320

                                                                       
Query: 121 cagttactctttataaaaaaaccactggaagaaaatgagactgaaaaaaattaagcattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagttactctttataaaaaaaccactggaagaaaatgagactgaaaaaaattaagcattt 380

                                                                       
Query: 181 attctgttttatattaagcttgaaatgtatccttgttagtcacactaaggaaacctttgc 240
           ||||||||| || |||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 381 attctgtttcatgttaagcttgaaaagtatccttgttggtcacactaaggaaacctttgc 440

                                                                       
Query: 241 agatgtattagggagacacatttcattttactcagttctaaagcaaaactccaggcaaga 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatgcattagggagacacatttcattttactcagttctaaagcaaaactccaggcaaga 500

                                                                       
Query: 301 gtgtctacctaatgttcccaactgataagcctcataggtgaatgctcatccatcttcgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtctacctaatgttcccaactgataagcctcataggtgaatgctcatccatcttcgac 560

                                                                       
Query: 361 tgctccagtgtctccactcttacaggatggtgtcctacaatgggaaagcatggggcaaag 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 tgctccagtgtctccactcttacaggatggtgtcctacaatgggaaagcatgggacaaag 620

                                                                       
Query: 421 agacacagtacagaacactagtgttagctccagtggtcatgcagtggttttggaacagat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agacacagtacagaacactagtgttagctccagtggtcatgcagtggttttggaacagat 680

                                                                       
Query: 481 ccctgggtccatgcagacatcttcactgcccttctgtgtagtcttttgggatcagcacat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccctgggtccatgcagacatcttcactgcccttctgtgtagtcttttgggatcagcacat 740

               
Query: 541 ctaa 544
           ||||
Sbjct: 741 ctaa 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)