TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATAAACCACCCTTCCCCTTTCCCAGACCATAATCTCAGAATTCC
ATTCTTAGCCTAATGGAAATATCACGAGGCTGGATTTTTGTCTGGCTCTG
TAAATAACTATCAACCTGGATTTAAAGTGTTGTTGAACTTTGCGGGCATT
GGATAACAGATATTTATCTGCAAAAGAAAACAGTTCTTTGTGTTTAGAAT
TAAAGAAATAACCTTTTGCCAATAATAATTTTCTAAAGGTTCATACTCTT
GAAGGTAGAATTAAGAACATATGGGCTCTCACCCCTGCCTCCCAAAATAG
TGTGAGAACTAAGTTCAGCGAACCACTTTTCAAAAACACATTCTTTCCCA
ATTTCACATAAATTCATACACAGACACATATTCTAACCATATTCCCTCAT
TATCATCTTACAGATTCCATTGCTTAGCCATGAGCTCAAGACTTTTTAGC
TTCAAATACAAATGGATCAGGTTTAAACCAAACTCTGTTCCTCTAAGTGA
TACACACACACACATTTATGTATACATATATATGAATGAATTAACAATAG
GGTCTCAAAAAAAACCAACAATTTTTTTTTTCTAAAAAGATGACTGGCGT
GTATAGACTATGCAAAGAACTAATATAAAGGAACCTGCATTATG

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTAAGAATATTACCTATTCAGTA
ACACTCAAATTTACTTCTAGTGGGGACAGTAAAAATAATCAGGCAATACA
ATTTAGTTGAATAGAGCTAGAAAGCTCAGGGCTAGTCTACATAGTAATTA
CTTAGCACAATAGCCGAGTCATACCCAAACACAGGAATACACAATGGCCT
AGGAAATAGGTGGGTTGTAGTATTATTCATGAAAGGGTTAGTAGAATGGA
ATTCCCCTGGTGCAGGTTTTTTCACTAGGCCAAGAGGAATAGCATAATCA
TGTATTGACTAAAGAACCCCTGGTGGTGGGTTTAACAATGGACTAGCATT
GTATCAGAGCATTCACCTGGCTCCTGTGTTTAGCTGATCTTAATTAGAGT
TGTTCCTATTCTCAGTTGTAAACAAGGTCTGGCTCCAGCCATCTTTTTAT
GTATACATTTTCTTTGTTTTGTGTTAAGAACCAAAGTACCTTGATGGATG
TATTCACCTAGCCTTCTTGTTTTTCTTCTGTATTAAAAGCCTGTTGTTTG
CTTGATAAACATTACATCCAAATACAGCACTCTCTTGTGCCCGTGTCCAT
TTGTCACCTTTTTCATCTTCTCCATACCCACCTGTAATAGGAACCCTGAC
ATTTTTTCCGAGGATTGAGAGAGGCTGACTGGGGCTCGTCTAGATTAGGT

Query= MSMg01no055_d21.b1 MSMg01no055_d21.b1 CHROMAT_FILE:
MSMg01no055_d21.b1 PHD_FILE: MSMg01no055_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:36 2005
         (641 letters)



>mm_chr10_34060844_34061888
          Length = 1045

 Score = 1168 bits (604), Expect = 0.0
 Identities = 631/642 (98%), Gaps = 6/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcataaaccacccttcccctttcccagaccataatctcagaattccattcttagcc 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcataaaccacacttcccctttcccagaccataatctcagaattccattcttagcc 264

                                                                       
Query: 65  taatggaaatatcacgaggctggatttttgtctggctctgtaaataactatcaacctgga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taatggaaatatcacgaggctggatttttgtctggctctgtaaataactatcaacctgga 324

                                                                       
Query: 125 tttaaagtgttgttgaactttgcgggcattggataacagatatttatctgcaaaagaaaa 184
           |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaaagtgtcgttgaactttgtgggcattggataacagatatttatctgcaaaagaaaa 384

                                                                       
Query: 185 cagttctttgtgtttagaattaaagaaataaccttttgccaataataattttctaaaggt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagttctttgtgtttagaattaaagaaataaccttttgccaataataattttctaaaggt 444

                                                                       
Query: 245 tcatactcttgaaggtagaattaagaacatatgggctctcacccctgcctcccaaaatag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcatactcttgaaggtagaattaagaacatatgggctctcacccctgcctcccaaaatag 504

                                                                       
Query: 305 tgtgagaactaagttcagcgaaccacttttcaaaaacacattctttcccaatttcacata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgagaactaagttcagcgaaccacttttcaaaaacacattctttcccaatttcacata 564

                                                                       
Query: 365 aattcatacacagacacatattctaaccatattccctcattatcatcttacagattccat 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 aattcatacacagacacatattctaaccatattccctcattatcatcttacagatttcat 624

                                                                       
Query: 425 tgcttagccatgagctcaagactttttagcttcaaatacaaatggatcaggtttaaacca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcttagccatgagctcaagactttttagcttcaaatacaaatggatcaggtttaaacca 684

                                                                       
Query: 485 aactctgttcctctaagtgatacacacacacaca----tttatgtatacatatatatgaa 540
           ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||
Sbjct: 685 aactctgttcctctaagtgatacacacacacacacacatttatgtatacatatatatgaa 744

                                                                       
Query: 541 tgaattaacaatagggtctcaaaaaaaa-ccaacaattttttttttctaaaaagatgact 599
           |||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||
Sbjct: 745 tgaattaacaatagggtctcaaaaaaaaaccaacaattttttttt-ctaagaagatgact 803

                                                     
Query: 600 ggcgtgtatagactatgcaaagaactaatataaaggaacctg 641
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ggcgtgtatagactatgcaaagaactaatataaaggaacctg 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1045
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1035
Effective search space:   653085
Effective search space used:   653085
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)