Query= MSMg01no055_j12.b1 MSMg01no055_j12.b1 CHROMAT_FILE:
MSMg01no055_j12.b1 PHD_FILE: MSMg01no055_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:02 2005
(311 letters)
>mm_chr10_101674906_101675617
Length = 712
Score = 487 bits (252), Expect = e-142
Identities = 294/308 (95%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 5 gaattccatatatccacttctggcattgaacttgtggacagccttctgcctctgactccc 64
|||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 512 gaattccatataaactcttctggcattgaacttgtggacagccttctgcctccgactccc 453
Query: 65 atcccagtgctggtattaaaagcatgtatcaacacaaccaattttattttaaaagtagaa 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 452 atcccagtgctggtattaaaagcatgtatcaacacaaccaattttattttaaaattagaa 393
Query: 125 ttgaatttttaatatctgtgatatctatttcagtaagtatttaaacattactgctttctt 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttaaatttttaatatctgtgatatctatttcagtaagtatttaaacattactgctttctt 333
Query: 185 catctcagaaaatgtggcatgtcaatacccagagtaccctaaatagacccaatcttgtat 244
||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 332 catttcagaaaatgtggcatgtcaatacccagaataccctaagtagacccaatcttgtat 273
Query: 245 gatgctaaaaagtatgaacgtgtttgcaaaaatatttcaaaatatattttcatatcaagt 304
||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 272 gatgccaaaaaatatgaacgtgtttgcaaaaatatttcaaaaaatatattcatatcaagt 213
Query: 305 a-aaatga 311
| ||||||
Sbjct: 212 ataaatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_j12.g1 MSMg01no055_j12.g1 CHROMAT_FILE:
MSMg01no055_j12.g1 PHD_FILE: MSMg01no055_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:02 2005
(174 letters)
>mm_chr10_101552694_101553267
Length = 574
Score = 337 bits (174), Expect = 3e-97
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 1 taaagtagcagaacgctatcttgacaatcaggagcatcaagaaaacctacacaaaaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaagtagcagaacgctatcttgacaatcaggagcatcaagaaaacctacacaaaaggga 260
Query: 61 acatctaaatgtattttttaatacataataaactcaatatgatactgaccttgcttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatctaaatgtattttttaatacataataaactcaatatgatactgaccttgcttttat 320
Query: 121 ctcttaaaaaatgaaacaaggaacaaagcagcttatcagattgtaaatctaaaa 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttaaaaaatgaaacaaggaacaaagcagcttatcagattgtaaatctaaaa 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
