Query= MSMg01no057_p23.b1 MSMg01no057_p23.b1 CHROMAT_FILE:
MSMg01no057_p23.b1 PHD_FILE: MSMg01no057_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:08 2005
(320 letters)
>mm_chr10_123215463_123216182
Length = 720
Score = 507 bits (262), Expect = e-148
Identities = 298/316 (94%), Gaps = 10/316 (3%)
Strand = Plus / Minus
Query: 5 gaattcttactcttcacgctctgcttatgggccagaattaggattaaatcgattgcatta 64
||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 710 gaatttttactcttcatgctctgcttatgggccagaattaggattaaatcaattgcatta 651
Query: 65 gtacagaatggtctgaatttgttcaaacaaattaatacatgaaagcctataatatgtagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gtacagaatggtctgaatttgttcaaacaaattaatacatgaaagcctataatatgtagc 591
Query: 125 acacatgcagaaacaccctcatacatacacagatgtgcacacacacacacacacacacac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 acacatgcagaaacaccctcatacatacacagatgtgcacacacacacacacacacacac 531
Query: 185 acacacacacacacacacatccttttcagcctcagctcttatctacagagaaatagcagg 244
|||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 530 acacacacac----------ccttttcaacctcagctctcatctacagagaaatagcagg 481
Query: 245 aaaaaccccactggtagatagaacagtgtgtcctactttgtattacattccccatcactg 304
||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 480 aaaaaccccactggtagatagaacactgtgtcctactttgtactagattccccatcactg 421
Query: 305 ctgtatcatttcctta 320
||||||||||||||||
Sbjct: 420 ctgtatcatttcctta 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_p23.g1 MSMg01no057_p23.g1 CHROMAT_FILE:
MSMg01no057_p23.g1 PHD_FILE: MSMg01no057_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:08 2005
(597 letters)
>mm_chr10_123135841_123136837
Length = 997
Score = 1085 bits (561), Expect = 0.0
Identities = 590/603 (97%), Gaps = 9/603 (1%)
Strand = Plus / Plus
Query: 1 cttggtgataaaatggtcctgccttcctgcaagagacatctgaggagctgtacagtgtgt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 198 cttggtgataaaatggtcctgccttcctgcaagagacatctggggagctgtacagtgtgt 257
Query: 61 agcctgctgcagtacatatctgttttcctaaaacattatcaaaattccagtgacccaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agcctgctgcagtacatatctgttttcctaaaacattatcaaaattccagtgacccaact 317
Query: 121 aatctgtggtcacacagatcttttgccccaccaaatctgtaaactagggtacttttcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aatctgtggtcacacagatcttttgccccaccaaatctgtaaactagggtacttttcatt 377
Query: 181 catcatggtctctgcatgtaaccatggatatataccaaatccctgccacactcccattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 catcatggtctctgcatgtaaccatggatatataccaaatccctgccacactcccattgc 437
Query: 241 tatttcttcctccacagatatctgctttatgtgctcctttttcttaaaaaaa-aaa---- 295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 438 tatttcttcctccacagatatctgctttatgtgctcctttttcttaaaaaaacaaacaaa 497
Query: 296 -aaacaaacaaaaccaacaaaacaaacaaacaaaaacaaaaaaaaaaacaaacaccctcc 354
|||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||
Sbjct: 498 caaacaaacaaaaccaacaaaacaaacaaacaaaaacaaaacaaaaaa-aaac--cctcc 554
Query: 355 tcttacttcatagaaagaatagaggaaattgggtatttagggaccttggtttcacattgt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcttacttcatagaaagaatagaggaaattgggtatttagggaccttggtttcacattgt 614
Query: 415 tcaatatattcaccccggcccatatcaggaccaacatctttcaccttcagtttggctaat 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcaatatattcaccccggcccatatcaggaccaacatctttcaccttcagtttggctaat 674
Query: 475 gtggattacatctccattaacccatgtgtgtgactttcctctgggtgccctatatcttgc 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtggattacatctccattaacccatgtgtgtgactttcctctgggtgccctatatcttgc 734
Query: 535 ttccttcatgaggggattctttttcaattgcccatttccttcttgaaatgttttttctct 594
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 735 ttccttcatgaggggattctttttcaattgcccatttccttcttgtactgttttttctct 794
Query: 595 ccc 597
|||
Sbjct: 795 ccc 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
