NNTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTAAAGCTTTCCAAGGAAAAGCCAAGTAGGTATTACCTAGAG
TATCAGAAGACACTTCATCTAATTTGATAGACTGACTGAATTATGTATGA
GTAGTGTTCCTGTCTGAAGAGACAGTGATGACCATGAGGAATCCTCATTC
CCTCTCACACTCTAGTATTTCTCATTCCCTATTAACTAGTTGTCAAGGCT
TTATACGGCCTGCTAATGAGCCCCAAGTCTGTCTGCATCTCTGTAAACTT
CCAGCCTTCTCATCCTCAGGTACAGTTGTCATTCCACCAGCTCCACCATC
ACTTCTAAAGGATTTATTATCTTACTCTGGCATAATTAAGCACTATCAAT
TTCCCCAACATTCAGAAAGCCACAGCCATAGGACATTTATCAAATTTTGT
GATGGTTTGCTAGACATTAACTTTTCTTTGTAGTGAAATATGCTCTAAAA
GACATCATGTATCATGTCTCTCTACTCAGGACTTTGTAAAATAGTTCTTA
CAGATGAGTCTGTCATGGCTGCCTGGGGAGAGAAGGTGCTGATGGAGGTG
TGTTTTTACTTTACCCTGAACTTTTCTATCTTTTTTAACGGATTATTCTC
CCGTTCCTTTGTATCTCCCTGCTTTTCCACCTTTCCCGCTTCCCCCTTCT
TGCCCTCGACTTCTAAT

NCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCTGTGTACCCCAAGTTT
TAATTAGGTTGTTGGCGTCTAACTTCTTGAGTTCTTTATAAATTTTGATA
TTAGCCCTTTATTGGGTGTAGGGTTAGTGAAAATCTTTTCCCAACCAATA
GGTTGCCATTTTGTCCTATTGACAGTGTCCTCCTATAAGTTGCCATTTTG
TCCTATTAACAGTGTCCTTTGCCTTACAGAAGCTTTACATCTTCATGAGG
TTGCCATTTATCCATTGTTGTTCTTAGAGCCTGAGCCATTGGTGTTCTGT
TCAGGAAATTGTCTCCTGTACCAAGAGGCTCAAGGCTCTTTCCCACTTCC
TTTTTTATGAGATTCCCCCCACCTGGCTTTATGTTGAGTCTCTCGATTTC
CCTCACTTCTAGTTTTGTCCCTACTGCATACTTTTATACTATATTCTTTC
TTCTACACGTACTCATTTTTTCATATAACTCATCTTCTTCTTATCTCTTT
TTCCTGTTCTTCTTAATCCGCCTTGTCTCCTTTCTCATTCTCTTTTATTA
TCTTTCTCTCTCGCTTCTTTATTCCTTCTCTTTCTTCTCTCTTTTCTTTT
TCCTTCCCCTCTCTTTTCTCCCTCTTTCCCTTTTCTTCCTTCCTTTACTT
TTTACCTCTTTCCCCCCTTTCTTTCACTTTTC

Query= MSMg01no059_e12.b1 MSMg01no059_e12.b1 CHROMAT_FILE:
MSMg01no059_e12.b1 PHD_FILE: MSMg01no059_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:45 2005
         (560 letters)



>mm_chr10_22091203_22092163
          Length = 961

 Score = 1002 bits (518), Expect = 0.0
 Identities = 548/558 (98%), Gaps = 1/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcttaaagctttccaaggaaaagccaagtaggtattacctagagtatcagaagaca 63
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttaaagcagtccaaggaaaagccaagtaggtattacctagagtatcagaagaca 263

                                                                       
Query: 64  cttcatctaatttgatagactgactgaattatgtatgagtagtgttcctgtctgaagaga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttcatctaatttgatagactgactgaattatgtatgagtagtgttcctgtctgaagaga 323

                                                                       
Query: 124 cagtgatgaccatgaggaatcctcattccctctcacactctagtatttctcattccctat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagtgatgaccatgaggaatcctcattccctctcacactctagtatttctcattccctat 383

                                                                       
Query: 184 taactagttgtcaaggctttatacggcctgctaatgagccccaagtctgtctgcatctct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taactagttgtcaaggctttatacggcctgctaatgagccccaagtctgtctgcatctct 443

                                                                       
Query: 244 gtaaacttccagccttctcatcctcaggtacagttgtcattccaccagctccaccatcac 303
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 444 gtaaacttccagccttctcatcctcaggtacagctgccattccaccagctccaccatcac 503

                                                                       
Query: 304 ttctaaaggatttattatcttactctggcataattaagcactatcaatttccccaacatt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttctaaaggatttattatcttactctggcataattaagcactatcaatttccccaacatt 563

                                                                       
Query: 364 cagaaagccacagccataggacatttatcaaattttgtgatggtttgctagacattaact 423
           |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagaaagtgatagccataggacatttatcaaattttgtgatggtttgctagacattaact 623

                                                                       
Query: 424 tttctttgtagtgaaatatgctcta-aaagacatcatgtatcatgtctctctactcagga 482
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 624 tttctttgtagtgaaatatgctctacaaagacatcatgtatcatgtctctctactcggga 683

                                                                       
Query: 483 ctttgtaaaatagttcttacagatgagtctgtcatggctgcctggggagagaaggtgctg 542
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 684 ctttgtaaaatagttcttacagatgagtctctcatggctgcctggggagagaaggtgctg 743

                             
Query: 543 atggaggtgtgtttttac 560
           ||||||||||||||||||
Sbjct: 744 atggaggtgtgtttttac 761


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 961
Length adjustment: 10
Effective length of query: 550
Effective length of database: 951
Effective search space:   523050
Effective search space used:   523050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)