Query= MSMg01no059_p15.b1 MSMg01no059_p15.b1 CHROMAT_FILE:
MSMg01no059_p15.b1 PHD_FILE: MSMg01no059_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:36 2005
(656 letters)
>mm_chr10_91011156_91012211
Length = 1056
Score = 1185 bits (613), Expect = 0.0
Identities = 642/655 (98%), Gaps = 8/655 (1%)
Strand = Plus / Plus
Query: 3 ggaattctctgtga-tctccgtaagacagtaagaccatatagaaatgagagggagctgtg 61
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctctgtgagcct-cgtaagacagtaagaccatatagaaatgagagggagctgtg 261
Query: 62 agctatatgcccagagtttcttagaactctgagcaggattctcccgtccaatggatccga 121
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agctatatacccagagtttcttagaactctgagcaggattctcccgtccaatggatccga 321
Query: 122 gtggtcactggatcaccccaacatagtgtggaagtgccaagaaggccctcatcagtgacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtggtcactggatcaccccaacatagtgtggaagtgccaagaaggccctcatcagtgacc 381
Query: 182 atgcagtaggcaatgattggagtcaagcaggactgtatgcacagtctcttgccttgtcat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atgcagtaggcaatgattggagtcaagcaggactgtatgcacagtctcttgccttgtcat 441
Query: 242 tctaatttctaaagctgaggtctagataatcttcctgttactacagaacaacaacaacaa 301
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 442 tctaatttctaaagctgaggtctagataatcttcctgggactacagaacaacaacaacaa 501
Query: 302 taacaacaaaacaaaacaaaaaaacaaaacaaaacaaaacaacccccccaaacccaaaac 361
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 502 taacaacaaaacaaaacaa------aaaacaaaacaaaacaacccccccaaacccaaaac 555
Query: 362 caaaaaaatggaataaaactctttgcaagtatatacccttaacataataagcaagtcttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 caaaaaaatggaataaaactctttgcaagtatatacccttaacataataagcaagtcttc 615
Query: 422 ctttgttaataagtgatgctttacctaggaatttcatagttcttgtttccttttaaagga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ctttgttaataagtgatgctttacctaggaatttcatagttcttgtttccttttaaagga 675
Query: 482 tgaccagtaacccttcttgctttgaaacagtagacctttgcagttaccatcagtttttct 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgaccagtaacccttcttgctttgaaacagtagacctttgcagttaccatcagtttttct 735
Query: 542 gagctctgcgcatctgtggaactctgttccatcataccggatgatggacagtttgtctgt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gagctctgcgcatctgtggaactctgttccatcataccggatgatggacagtttgtctgt 795
Query: 602 ggagatgatctgttcttctttcccttcctgcccaggtgaatcaccacacgtatta 656
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 796 ggagatgatctgttcttctttcccttcctgcccaggtgaatcaccacaggtatta 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_p15.g1 MSMg01no059_p15.g1 CHROMAT_FILE:
MSMg01no059_p15.g1 PHD_FILE: MSMg01no059_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:36 2005
(455 letters)
>mm_chr10_91141615_91142470
Length = 856
Score = 866 bits (448), Expect = 0.0
Identities = 454/456 (99%), Gaps = 1/456 (0%)
Strand = Plus / Minus
Query: 1 tgatgtcatggagcatctcagaataggacatacacacagagtgaggtcaggtcacccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 656 tgatgtcatggagcatctcagaataggacatacacacagagtgaggtcagggcacccacc 597
Query: 61 gtaatggtgcaaggttagcaaataaacatggtgggaagtttggtgcccttagatgaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gtaatggtgcaaggttagcaaataaacatggtgggaagtttggtgcccttagatgaaaca 537
Query: 121 aacaggacagctgaacttgacacggtgctcctttctgattagcatcttgatgagtgagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aacaggacagctgaacttgacacggtgctcctttctgattagcatcttgatgagtgagca 477
Query: 181 cccaggatgctttatacgatctattcatgcatttttacagtgatttctcacttattagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cccaggatgctttatacgatctattcatgcatttttacagtgatttctcacttattagct 417
Query: 241 tctggggatattctccatatgacataaagtcctttgtggatgagaggaggtatacatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tctggggatattctccatatgacataaagtcctttgtggatgagaggaggtatacatcag 357
Query: 301 caagacacagaggtactggggaaaaagaaaatgagacatgatgtgggggagaaggtaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 caagacacagaggtactggggaaaaagaaaatgagacatgatgtgggggagaaggtaact 297
Query: 361 tccgtttctacatgtagtgagtaaagtttttttttttt-cctttttcgtagtttttctca 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 296 tccgtttctacatgtagtgagtaaagtttttttttttttcctttttcgtagtttttctca 237
Query: 420 taactgttgatccttccctggtcctctcatctctgt 455
||||||||||||||||||||||||||||||||||||
Sbjct: 236 taactgttgatccttccctggtcctctcatctctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 856
Length adjustment: 10
Effective length of query: 445
Effective length of database: 846
Effective search space: 376470
Effective search space used: 376470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
