Query= MSMg01no060_d23.b1 MSMg01no060_d23.b1 CHROMAT_FILE:
MSMg01no060_d23.b1 PHD_FILE: MSMg01no060_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:56 2005
(291 letters)
>mm_chr10_35798803_35799492
Length = 690
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgatggtcgcaaataacattgtagatgccctggttcaaaagtaggagctgaag 64
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcttgatggt-gcaaataacattgtagatgccctggttcagaagtaggagctgaag 263
Query: 65 cttaaaattgggaggtcctcttttcggatggcaacctttgattggtcctgaaatatgaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttaaaattgggaggtcctcttttcggatggcaacctttgattggtcctgaaatatgaaa 323
Query: 125 gaagctacaaacaaaatattacatgaagtccaatttatagttgcctgaaaatatcctcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaagctacaaacaaaatattacatgaagtccaatttatagttgcctgaaaatatcctcca 383
Query: 185 gtcctcaaattcatgttaacttcttttcagagacccttaatgagaaacaactctctaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtcctcaaattcatgttaacttcttttcagagacccttaatgagaaacaactctctaaat 443
Query: 245 taaatttctgaaggacaacatatgattagatgttccttgaaaaggaa 291
|||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 444 taaatttctgaaggacaacatatgattagatgttccttgacaaggaa 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no060_d23.g1 MSMg01no060_d23.g1 CHROMAT_FILE:
MSMg01no060_d23.g1 PHD_FILE: MSMg01no060_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:56 2005
(497 letters)
>mm_chr10_35879781_35880677
Length = 897
Score = 915 bits (473), Expect = 0.0
Identities = 488/493 (98%)
Strand = Plus / Minus
Query: 5 tcctcccaggtgtctcacttgtatctgcagcctaagccataggctagagactttttaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tcctcccaggtgtctcacttgtatctgcagcctaagccataggctagagactttttaatt 518
Query: 65 gacaggtaataattcatgaaatacacaagatattcttcctacaatgttttcagatgtgta 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 517 gacaggtaataattcatgaaatacacaagatattcttcctacagtgttttcagatgtgta 458
Query: 125 aatgcaagttagaaaggtctatgagaatgatttgagatatgtatataaagttatattttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aatgcaagttagaaaggtctatgagaatgatttgagatatgtatataaagttatattttt 398
Query: 185 aaaaatttcctatttctttcctcctcccaatgctaaaacatctgaagttcaaatttttca 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaaaatttcctattcctttcctcctcccaatgctaaaacatctgaagttcaaatttttca 338
Query: 245 atatcaatcaatagctttgatgactggtaaagctcaagagttggaatttcctttgtttgt 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atatcaatcaatagttttgatgactggtaaagctcaagagttggaatttcctttgtttgt 278
Query: 305 cttctaagaatcgactttaaagtgcttcccaactgtgacaaaaacatctctctctgatcc 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 277 cttctaagaatcgactttaaagtgctccccaactgtgacaaaaacatctctctctgatcc 218
Query: 365 atacatctatccctctgggttttaaaataaaaagtgttaatgctttagaccagaatctat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 217 atacatctatccctctgggttttaaaataaaaagtgttaatgctttagaccagaatcgat 158
Query: 425 ttttgagtattcaagctttgactataattcaaaagtgtgagtgtaacacatttaaaacaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ttttgagtattcaagctttgactataattcaaaagtgtgagtgtaacacatttaaaacaa 98
Query: 485 tatggattacata 497
|||||||||||||
Sbjct: 97 tatggattacata 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
