Query= MSMg01no060_f15.b1 MSMg01no060_f15.b1 CHROMAT_FILE:
MSMg01no060_f15.b1 PHD_FILE: MSMg01no060_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:04 2005
(663 letters)
>mm_chr10_91823794_91824855
Length = 1062
Score = 1118 bits (578), Expect = 0.0
Identities = 599/606 (98%), Gaps = 1/606 (0%)
Strand = Plus / Minus
Query: 56 aacattgtcccctgaccttcacatggatgcagtggcacacgcatccatttatacacatca 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 aacattgtcccctgaccttcacatggatgcagtggcacacgcatccatttatacacatca 1003
Query: 116 tgtacggtactgacatatatactcatgataatattaattttatttcaaaagtggtatata 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tgtacggtactgacatatatactcatgataatattaattttatttcaaaagtggtatata 943
Query: 176 gactagtacaaaggttactttggcatagggtaggccaaagactttgcatttctaacaagt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 gactagtacaaaggttactttggcatagggtaggccaaagactttgcatttctaacaagt 883
Query: 236 tcgcaggtaatgcttgttgatgcatgcaaagtgctttggctagttaagccttaagcaaac 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 tcgcaggtaatgcttgttgatgcatgcaaagtgctttggctagttaagccttaagcaaac 823
Query: 296 ttgctaaagttagctactctatgttccacagcatggtgggaccttcactaccatgctagg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ttgctaaagttagctactctatgttccacagcatggtgggaccttcactaccatgctagg 763
Query: 356 gtggtcctgccttgccaccacccctcagtagcaatatccattttgtgtcaattagcttgt 415
||||||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct: 762 gtggtcctgccttgcta-tagggctcagtagcaatatccattttgtgtcaattagcttgt 704
Query: 416 ttcactatcaaatcaggtaaaactgattgatgcattaactcaagagtagaacaattgatt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ttcactatcaaatcaggtaaaactgattgatgcattaactcaagagtagaacaattgatt 644
Query: 476 gttggatctactaataaataatttgaacatggagatgtgaatcaaggccatcaaagcaaa 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gttggatctactaataaataatttgaacatggagatgtgaatcaaggccatcaaagcaaa 584
Query: 536 agagagtcatttccagtagttgtaggcttccacagttaaggccaatgttaaccctctttt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agagagtcatttccagtagttgtaggcttccacagttaaggccaatgttaaccctctttt 524
Query: 596 ccaattctctggaagtttcaaaaggcccagagctgccaaggcttttacataacctgataa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 523 ccaattctctggaagtttcaaaaggcccagagctgccaaggcttttacataacctgaaaa 464
Query: 656 tgaata 661
||||||
Sbjct: 463 tgaata 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1062
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1052
Effective search space: 686956
Effective search space used: 686956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_f15.g1 MSMg01no060_f15.g1 CHROMAT_FILE:
MSMg01no060_f15.g1 PHD_FILE: MSMg01no060_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:04 2005
(652 letters)
>mm_chr10_91672678_91673729
Length = 1052
Score = 1230 bits (636), Expect = 0.0
Identities = 648/652 (99%)
Strand = Plus / Plus
Query: 1 atctcgaactcactaaagtgaaaaaaaaaatccaggaaatgagctaaggaactgattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctcgaactcactaaagtgaaaaaaaaaatccaggaaatgagctaaggaactgattttt 260
Query: 61 ttgttgttgagaaaaagccctcgataccaagatcatctttggggtactggttcctctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgttgttgagaaaaagccctcgataccaagatcatctttggggtactggttcctctaac 320
Query: 121 tccattccactgacttctgattgtatttccacaggaagaaaaggaggagagaaggaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccattccactgacttctgattgtatttccacaggaagaaaaggaggagagaaggaggtt 380
Query: 181 ccaaaatgaagcagcctagaccctgacggttaggaacaggttcagaaggatggctgactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaaatgaagcagcctagaccctgacggttaggaacaggttcagaaggatggctgactg 440
Query: 241 ctcagtctggcctcaatatgggctaaagaaccatacaagggagcagagagagccttctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcagtctggcctcaatatgggctaaagaaccatacaagggagcagagagagccttctga 500
Query: 301 gctgaatagcaatcaaaatgtacagccgaagcaaaaggagaccaccccaaatccaattag 360
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 501 gctgaatagcaatcaaaatgtacagccgaagcaaaaggagaagatcccaaatccaattag 560
Query: 361 aactctaaagggtacggaaacacagccctcactggttttctaggggcatagccaggatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactctaaagggtacggaaacacagccctcactggttttctaggggcatagccaggatcg 620
Query: 421 ttaatagaatgaaatttccacttgatgttggaaactgaagaactcagaaaggataatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaatagaatgaaatttccacttgatgttggaaactgaagaactcagaaaggataatacc 680
Query: 481 aagacacagcacagatgtggtcttcccaggacacaaatgagtttccacaccaaccttttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagacacagcacagatgtggtcttcccaggacacaaatgagtttccacaccaaccttttt 740
Query: 541 gaattctaccacagcagcaagagctttggatcagatctaatgccagttcctggattataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 741 gaattctaccacagcagcaagagctttggatcagatctaatgccagttcctggattaaaa 800
Query: 601 aataaccacggcaacatttgccagtaggaagctcttaaccatacttaagtct 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aataaccacggcaacatttgccagtaggaagctcttaaccatacttaagtct 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
