CATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGGAGNGAGACCGCGGA
ATTCAGTGTTTCCAAATTCTTTATGACAGTAGAATAATGATAGTTTCCCC
CTCCCCACAGCCCCCATTTTCCCATCAGATTCTACTTTCCTTCCAAAATT
AGTTTCCTAGCTCCTTCCTCTTCTGAGCCCTTACCAGAACTTCCAAATAA
ACTCCATTTATAACACTTGAAATTTCCTAGCCTATTCCTCCAAATTCTTC
TAACCTCTTCTAGTTAGTTACCCAATTCCAAAGCTGCCTCCCCATTTTCA
GGTATAGTTATAGTAACAATAATACATGTAGTTACAGTATACATACAATA
TTACAATAGAATACAGTATATGTACAAGGTTTACATATAGTTACAACTCT
GTAGTAGTTTCTGGCACCAGTTTTTCATGTTACCGTCTGCTCATAACTAT
TGCAGTGAAACCCTGAGGCAGCCTAAGTTTACAGAGAAAACAGGTTCTTT
GGTCCCAGAGATTGAAGAGAAAGGCATTGGCGCTGGCTTGGCTCAGGTGA
GGCTTGCACGGCACGGCACGTGGCAGAGTGCACATTCACAGGGAGCATCT
CACGCAGAAGCCAGAGTGCGCTCGCCCTTCCAACAGCTCGCTCTCCTGCA
AGGCTCCCACAGCAGCCTAAGAACAGCCCTGAAGTCTTTTTTTTAATATT
ATTTGTTTTATG

TGAATGTGGCCGGNNGGGNGGNNGATCGAAGCCGAGTNNNNGNGNNNNNT
TTACGGCACGAGGAGNNNANNNNNNGGNNNNANNNGGAGNAGAAGNGAAA
ATTTTTCCCGGAAAAGAGGGAGNANNAGAGANNNNAAAAANNGAGNNGAA
AAGGGGAGAAGGGNNGNNAANAAGGGNAAAGGGNAANNNNNNNNAANAGG
GANANNNNNANNNNNNNNNNNNNNNNNNNAGNNNTTAGTANNGAGGGAGN
NNNNNNNNNNNNNNNNCNAGGGAAGGGAGGGGGAACCTTACAACNACCAT
TCCAGTTTTTTNGGGGAACAAAAANNCNCGCCCCAAAAGGNAAAAANGGG
CCCCAAGAAACCCGGGGCAAGAANANCCACACCCCCGGGTTTTTTTTCTC
CCCCCAAAAAAAANNNNNNNNNAGNATATGATAGAGAGGGAGGNNNNNNN
NNTTTTTTCCCCCCCCNAGGAATATACGCCTCGCGCGNCCGGNNNNNNTT
TTNCNCACAGGGGGGAGGAGGGACCCGCTCCCCCCCCCCCTTTTTTTCCA
CNNCTCAGAGTGGTAGGAGGGACACCACCTCCCCCTCTCCCCCTCAACCA
CCCNCNNACCCCATTCAACAAAAAGCCCCTTTAACCACCGCAGCCCTCAA
GAAAAAAATAATATTGTTTTTTTTACAAAACAAAAGAAACTACAGAAAAA
ATTATAATAAAAATACCATCTTATAGATATGGAAGTTCC

Query= MSMg01no060_o01.b1 MSMg01no060_o01.b1 CHROMAT_FILE:
MSMg01no060_o01.b1 PHD_FILE: MSMg01no060_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:42 2005
         (638 letters)



>mm_chr10_84438394_84439426
          Length = 1033

 Score = 1077 bits (557), Expect = 0.0
 Identities = 615/639 (96%), Gaps = 11/639 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctttatgacagtagaataatgatagtttccccctccccacagcccccattttcccatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttatgacagtagaataatgatagtttccccctccccacagcccccattttcccatca 260

                                                                       
Query: 61  gattctactttccttccaaaattagtttcctagctccttcctcttctgagcccttaccag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattctactttccttccaaaattagtttcctagctccttcctcttctgagcccttaccag 320

                                                                       
Query: 121 aacttccaaataaactccatttataacacttgaaatttcctagcctattcctccaaattc 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacttccaattaaactccatttataacacttgaaatttcctagcctattcctccaaattc 380

                                                                       
Query: 181 ttctaacctcttctagttagttacccaattccaaagctgcctccccattttcaggtatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctaacctcttctagttagttacccaattccaaagctgcctccccattttcaggtatag 440

                                                                       
Query: 241 ttatagtaacaataatacatgtagttacagtatacatacaatattacaatagaatacagt 300
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| 
Sbjct: 441 ttatagtaacaataatacatgtagttacagtatacatacactattacaatagaatacagg 500

                                                                       
Query: 301 atatgtacaaggtttacatatagttacaactctgtagtagtttctggcaccagtttttca 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 atatgtacaaggtttacatatagttacaactctgtagtagtttctggtaccagtttttca 560

                                                                       
Query: 361 tgttaccgtctgctcataactattgcagtgaaaccctgaggcagcctaagtttacagaga 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttaccgtctgctcgtaactattgcagtgaaaccctgaggcagcctaagtttacagaga 620

                                                                       
Query: 421 aaacaggttctttggtcccagagattgaagagaaaggcattggcgctggcttggctcagg 480
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 621 aaacaggttctttggtcccagagattgaagagaaaggcattggcactggcttggct-agg 679

                                                                       
Query: 481 tgaggcttgcacggcacggcacgtggcaga-gtgcacattcacagggagcatctcacgca 539
           ||||||||||||||||||     ||||||| |||||| ||||||||||||||||||||||
Sbjct: 680 tgaggcttgcacggcacg-----tggcagaagtgcacgttcacagggagcatctcacgca 734

                                                                       
Query: 540 gaagccagagtgcgctcgcccttccaacagctcgctctcctgcaaggctcccacagcagc 599
           |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||  ||
Sbjct: 735 gaagccagcgtgcactcgcccttccaacagctcgctctcctgcaaggcttccacagttgc 794

                                                  
Query: 600 ctaagaacagccctgaagtctttttttt----aatatta 634
           |||||||||||||||| |||||||||||    |||||||
Sbjct: 795 ctaagaacagccctgaggtcttttttttttttaatatta 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1033
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1023
Effective search space:   642444
Effective search space used:   642444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)