Query= MSMg01no061_d07.b1 MSMg01no061_d07.b1 CHROMAT_FILE:
MSMg01no061_d07.b1 PHD_FILE: MSMg01no061_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:07 2005
(183 letters)
>mm_chr10_123720999_123721577
Length = 579
Score = 267 bits (138), Expect = 3e-76
Identities = 168/180 (93%), Gaps = 4/180 (2%)
Strand = Plus / Minus
Query: 4 ttttttaatttatttgggttagtaggaaacaattttgatcaactagagaatgtttttttt 63
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 379 ttttttaatttatttgggtcagtaggaaacaattttgatcaactagagaatgattttt-- 322
Query: 64 tcttaagataaattgcacatgtgaagtctttaacacaggaattttatgttttcactgcag 123
|||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||
Sbjct: 321 --ttaagataaattgcacatgtaaagtccttaacacaggaactttatgttttcactgcag 264
Query: 124 ctaaaaagtataatttttgctatggaaggccatgtaaaggcttattagcaaattaaaaac 183
|||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 263 ctaaaaagtaaaatttttgctatggaaggccatgtaaaggtttattagaaaattaaaaac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 579
Length adjustment: 8
Effective length of query: 175
Effective length of database: 571
Effective search space: 99925
Effective search space used: 99925
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no061_d07.g1 MSMg01no061_d07.g1 CHROMAT_FILE:
MSMg01no061_d07.g1 PHD_FILE: MSMg01no061_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:07 2005
(253 letters)
>mm_chr10_123572932_123573584
Length = 653
Score = 466 bits (241), Expect = e-136
Identities = 250/253 (98%)
Strand = Plus / Plus
Query: 1 attctgctgtaaaattaagtctcctaaatattacagggaagccactacacctataaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgctgtaaaattaagtctcctaaatattacagggaagccactacacctataaaatt 260
Query: 61 taaacaacatggtttcccaaataagtctcataaaattttagtgctgtatactgtaggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaacaacatggtttcccaaataagtctcataaaattttagtgctgtatactgtaggtgt 320
Query: 121 tgttcatataactatgctcgtgcatctgtctgtacacatagtgacacatgctacttcttc 180
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 321 tgttcatataactatgctcgtgcatctgtctgtacacacagtgaaacatgctacttcttc 380
Query: 181 acaatcaaagaactataatttttagggcaatgtctccccactagaaagtagattgtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaatcaaagaactataatttttagggcaatgtctccccactagaaagtagattgtttac 440
Query: 241 tctgtcattttga 253
||||| |||||||
Sbjct: 441 tctgttattttga 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
