Query= MSMg01no061_p15.b1 MSMg01no061_p15.b1 CHROMAT_FILE:
MSMg01no061_p15.b1 PHD_FILE: MSMg01no061_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:06 2005
(420 letters)
>mm_chr10_123215363_123216182
Length = 820
Score = 708 bits (366), Expect = 0.0
Identities = 402/420 (95%), Gaps = 10/420 (2%)
Strand = Plus / Minus
Query: 1 gcttatgggccagaattaggattaaatcgattgcattagtacagaatggtctgaatttgt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 788 gcttatgggccagaattaggattaaatcaattgcattagtacagaatggtctgaatttgt 729
Query: 61 tcaaacaaattaatacatgaaagcctataatatgtagcacacatgcagaaacaccctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tcaaacaaattaatacatgaaagcctataatatgtagcacacatgcagaaacaccctcat 669
Query: 121 acatacacagatgtgcacacacacacacacacacacacacacacacacacacacacaccc 180
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 668 acatacacagatgtg----------cacacacacacacacacacacacacacacacaccc 619
Query: 181 ttttcagcctcagctcttatctacagagaaatagcaggaaaaaccccactggtagataga 240
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttttcaacctcagctctcatctacagagaaatagcaggaaaaaccccactggtagataga 559
Query: 241 acagtgtgtcctactttgtattatattccccctcactgctgtatcatttccttagatgaa 300
||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 558 acactgtgtcctactttgtactagattccccatcactgctgtatcatttccttagatgaa 499
Query: 301 ggacctgaagatgcaagtccacactaatgtgcctggggagagattggctctgattttgct 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 498 ggacctgaagatgcaagtccacactaatgtgcctagggagagattggctctgattttgct 439
Query: 361 ttagaatccatcactgcacagtagggaattgattggtaattttcttgtttctgcccaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttagaatccatcactgcacagtagggaattgattggtaattttcttgtttctgcccaggc 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_p15.g1 MSMg01no061_p15.g1 CHROMAT_FILE:
MSMg01no061_p15.g1 PHD_FILE: MSMg01no061_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:06 2005
(371 letters)
>mm_chr10_123135838_123136608
Length = 771
Score = 659 bits (341), Expect = 0.0
Identities = 365/377 (96%), Gaps = 9/377 (2%)
Strand = Plus / Plus
Query: 1 cttggtgataaaatggtcctgtcttcctgcaagagacatctgaggagctgtacagtgtgt 60
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 201 cttggtgataaaatggtcctgccttcctgcaagagacatctggggagctgtacagtgtgt 260
Query: 61 agcctgctgcagtacatatctgttttcctaaaacattatcaaaattccagtgacccaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcctgctgcagtacatatctgttttcctaaaacattatcaaaattccagtgacccaact 320
Query: 121 aatctgtggtcacacagatcttttgccccaccaaatctgtaaactagggtacttttcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatctgtggtcacacagatcttttgccccaccaaatctgtaaactagggtacttttcatt 380
Query: 181 catcatggtctctgcatgtaaccatggatatataccaaatccctgccacactcccattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcatggtctctgcatgtaaccatggatatataccaaatccctgccacactcccattgc 440
Query: 241 tatttcttcctccacagatatctgctttatgtgctcctttttcttaaaaaaa-aaa---- 295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tatttcttcctccacagatatctgctttatgtgctcctttttcttaaaaaaacaaacaaa 500
Query: 296 -aaacaaacaaaaccaacaaaacaaacaaacaaaaacaaaaaaaaaaacaaaaaccctcc 354
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 501 caaacaaacaaaaccaacaaaacaaacaaacaaaaacaaaacaaaaaa---aaaccctcc 557
Query: 355 tcttacttcatagaaag 371
|||||||||||||||||
Sbjct: 558 tcttacttcatagaaag 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
