Query= MSMg01no062_b15.b1 MSMg01no062_b15.b1 CHROMAT_FILE:
MSMg01no062_b15.b1 PHD_FILE: MSMg01no062_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:20 2005
(662 letters)
>mm_chr10_42792473_42793535
Length = 1063
Score = 1228 bits (635), Expect = 0.0
Identities = 655/662 (98%), Gaps = 1/662 (0%)
Strand = Plus / Minus
Query: 1 caggagagggaatggtacaggncttgtccattccagctgcagcagctgcagagtgagaac 60
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 862 caggagagtgaatggtacaggccttgtccattccagctgcagcagctgcagagtgagaac 803
Query: 61 ctccttcaggcagcacagcagacacggtcacaatggtgccactcagcccgtgtgtgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctccttcaggcagcacagcagacacggtcacaatggtgccactcagcccgtgtgtgcagc 743
Query: 121 gcccttgaccaactatgctgcaggcagactcactgcttataaatgcagttgttggcatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gcccttgaccaactatgctgcaggcagactcactgcttataaatgcagttgttggcatga 683
Query: 181 aaatttaactcgcctgatattttatttgagggctcttaaacatccaggtctgctgtaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaatttaactcgcctgatattttatttgagggctcttaaacatccaggtctgctgtaaca 623
Query: 241 ttttatattcctcagggtattttcacaatgctttttttgctgtcttggtaactgtggtca 300
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 622 ttttatattcctcagggtattttcacaatgcttttaatgccgtcttggtaactgtggtca 563
Query: 301 tccatgcctgggggttagaggggagcatttgtgctgttttaggatcagaatgcttttagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tccatgcctgggggttagaggggagcatttgtgctgttttaggatcagaatgcttttagg 503
Query: 361 actggctcccttctttgtagaaagattgtgaagactaatataccattcttaggtttcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 actggctcccttctttgtagaaagattgtgaagactaatataccattcttaggtttcccc 443
Query: 421 tatgtgttggaaaagtaaatgtgctttagagtatactggaggaaaagaaaattttttaaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 442 tatgtgttggaaaagtaaatgtgctttagagtatactggaggaaaagaaaatttttaaaa 383
Query: 481 aaaaatgtgaacatcatttccagatccgtttagagaaggtgcacacgcttgcgttgcctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaaatgtgaacatcatttccagatccgtttagagaaggtgcacacgcttgcgttgcctg 323
Query: 541 actgacagccctgctgagttggcgggagtttcgagaggtttggtgcgagcttcactgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actgacagccctgctgagttggcgggagtttcgagaggtttggtgcgagcttcactgcag 263
Query: 601 tttctgttagaaatgcttgcccttgttcagcttac-ttccctatgatgaaaaagaagaca 659
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 262 tttctgttagaaatgcttgcccttgttcagcttactttccctatgatgaaaaagaagaca 203
Query: 660 ga 661
||
Sbjct: 202 ga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_b15.g1 MSMg01no062_b15.g1 CHROMAT_FILE:
MSMg01no062_b15.g1 PHD_FILE: MSMg01no062_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:20 2005
(582 letters)
>mm_chr10_42642956_42643939
Length = 984
Score = 1042 bits (539), Expect = 0.0
Identities = 573/585 (97%), Gaps = 4/585 (0%)
Strand = Plus / Plus
Query: 1 aatgacttactatggtatccagcatctgtccccacttaccctccactgctgtccattact 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgacttattatggtatccagcatctgtccccacttaccctccactgctgtccattact 260
Query: 61 ctgatctaacctagtgccaggtgcaaagtgacttattggccccatgtctctggcttgtct 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatctaacctagtgccaggtgcagagtgacttattggccccatgtctctggcttgtct 320
Query: 121 ttaccagttccattagtgtaaacaccatcttctcac-gtgacgtttcaggaagaccctca 179
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tcaccagttccattagtgtaaacaccatcttctcacggtgacgtttcaggaagaccctca 380
Query: 180 cagtggtggctactccttccgatccccatctgcattgtctgatggtttgctacaggaagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtggtggctactccttccgatccccatctgcattgtctgatggtttgctacaggaagt 440
Query: 240 cactgctggaacagctagtctgaaacctg--gagagctcttgctgtgagctcatcagaga 297
||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 441 cactgct-gaacagctagtctgaaacctggagagagctcatgctgtgagctcatcagaga 499
Query: 298 atgggaacagcaccatgccctatctcctggtggatacagggagagcctacagctgggatt 357
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgggaacagcaccatggcctatctcctggtggatacagggagagcctacagctgggatt 559
Query: 358 ctacctagcacagagctgtgggcagagcactgccctgcagtctgtgttctagtcttggga 417
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 560 ctacctagcacagagctgtgggcagagcactgccctgcagtctgtgttctaatcttggga 619
Query: 418 gcttgtgtgtcttaactgttcatgcctctctgtgttcctacacccgttgcctggtgctgt 477
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 620 gcttgtgtgtcttaactgttcatgcctctctgtgttcctacacacgttgcctggtgctgt 679
Query: 478 catttcccgggcagtgtcaatgtacgggtacagagctctcctctgaggataatccaaata 537
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 catttcccgggcagtgtcaatgtaagggtacagagctctcctctgaggataatccaaata 739
Query: 538 caaattttgaacatgaacttgaatctgaagctctgttcccaaagc 582
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caaattttgaacatgaacttgaatctgaagctctgttcccaaagc 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 984
Length adjustment: 10
Effective length of query: 572
Effective length of database: 974
Effective search space: 557128
Effective search space used: 557128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
