Query= MSMg01no062_i05.b1 MSMg01no062_i05.b1 CHROMAT_FILE:
MSMg01no062_i05.b1 PHD_FILE: MSMg01no062_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:11 2005
(689 letters)
>mm_chr10_98506270_98507358
Length = 1089
Score = 1187 bits (614), Expect = 0.0
Identities = 668/690 (96%), Gaps = 9/690 (1%)
Strand = Plus / Plus
Query: 1 ctgggtagatgacccccacatttttttgtgcatttccacgaggacatagtagaagagaat 60
||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 208 ctgggtagatgacaggcacatttttttgtgcatttccacg-------agtagaagagaat 260
Query: 61 tcacttctacttcgagctgtagcttcacaccaacgtgggcttataccagatgggcttgaa 120
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacttctactttgagctatagcttcacaccaacgtgggcttataccagatgggcttgaa 320
Query: 121 ttggagaaatattaagcatctattatatggcaatccatgtggatagcccgagggaaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggagaaatattaagcatctattatatggcaatccatgtggatagcccgagggaaaact 380
Query: 181 agttcaaagacaactcgggcatgttaagcatgtctaggttgtagcatagcacataaccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttcaaagacaactcgggcatgttaagcatgtctaggttgtagcatagcacataaccac 440
Query: 241 cataactcatgaaattcctcacccttcacaaacctcccttatgtctgaatactaggagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataactcatgaaattcctcacccttcacaaacctcccttatgtctgaatactaggagtt 500
Query: 301 gctcaggtggtgggaaattcgcctatcttttgtatactgtgtactatataaaggcatcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctcaggtggtgggaaattcgcctatcttttgtatactgtgtactatataaaggcatcat 560
Query: 361 ttatagacctgcatgaatttccttccttggcctgcagctcattgctaagcaagtgacctg 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 ttatagacctgcatgaatttccttccttggcctgcagctcactgctaagcaagtgacctg 620
Query: 421 ggacccatgcactctacagactaccttccaacttcatccttctggcctgttcctttgtgc 480
||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct: 621 ggacccatgcactctacagaccaccttccaacttcatgcttctggcctgctcctttgtgc 680
Query: 481 cccgcttgtcctgaatgatctcctggaagcagatgtatgctccttctggagagaggtatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccgcttgtcctgaatgatctcctggaagcagatgtatgctccttctggagagaggtatg 740
Query: 541 ggacagtgagttttaactgacaacgt-gtcaggccatagaatcacccacgaagggagtgt 599
|||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||
Sbjct: 741 ggacagtgagttttaactgacaac-tcgtcaggccgtagaatcacccacgaagggagtgt 799
Query: 600 tagtgagtagtgtctagatcaagctccctggtgaagacaccacccaggactacacagtga 659
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 800 tagtgagtagtgtctagatcaagctccctggtgaagacgccgcccaggactacacagtga 859
Query: 660 gaccctgtctcaatgataattaaacaaata 689
||||||||||||||||||| ||||||||||
Sbjct: 860 gaccctgtctcaatgataaataaacaaata 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_i05.g1 MSMg01no062_i05.g1 CHROMAT_FILE:
MSMg01no062_i05.g1 PHD_FILE: MSMg01no062_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:11 2005
(502 letters)
>mm_chr10_98699532_98700433
Length = 902
Score = 917 bits (474), Expect = 0.0
Identities = 495/502 (98%)
Strand = Plus / Minus
Query: 1 gacgaagaccagtactcaaacacctttcctaagcagcaggacctgaccccacagagcttc 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 594 gacgaagaccagtactcaaacacctttcctaagcagcaggacctgacagcacagagcttc 535
Query: 61 ccacggagatgtggcaaggctgtgtgaactgtgtgggctgtggccacgtaggtgagcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ccacggagatgtggcaaggctgtgtgaactgtgtgggctgtggccacgtaggtgagcatg 475
Query: 121 tctgtaggaattctgacgtggtaagtagccctaggagacacagtcattcttcgagtgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctgtaggaattctgacgtggtaagtagccctaggagacacagtcattcttcgagtgtgc 415
Query: 181 ttgttgatgttggagtgtggcttgctctccaggactgttttcaagaacctacttaaacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttgttgatgttggagtgtggcttgctctccaggactgttttcaagaacctacttaaacac 355
Query: 241 atatccttgggccgttggagagaagagggaaagagaaatctgtatcccctgccaagtttc 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 354 atatccttgggccgttggagagaagagggaaagagaaatttgtatcccctgccaagtttc 295
Query: 301 ctggataatattttattattaaatgatgtatgtgtcacaagactcagaagacagcgatgg 360
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctggataatattttaggaggaaatgatgtatgtgtcacaagactcagaagacagcgatgg 235
Query: 361 aagaagacattcttcataaataagaacttgctgcccatgttcctattattactgcggctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aagaagacattcttcataaataagaacttgctgcccatgttcctattattactgcggctc 175
Query: 421 tgagatatagcttgaaatctgatatggtaatccctcgagggttgctctttttgctctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tgagatatagcttgaaatctgatatggtaatccctcgagggttgctctttttgctctgaa 115
Query: 481 ttactttggcaatctggagcgg 502
||||||||||||||||||||||
Sbjct: 114 ttactttggcaatctggagcgg 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
