Query= MSMg01no063_d11.b1 MSMg01no063_d11.b1 CHROMAT_FILE:
MSMg01no063_d11.b1 PHD_FILE: MSMg01no063_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:29 2005
(313 letters)
>mm_chr10_82266944_82267659
Length = 716
Score = 574 bits (297), Expect = e-168
Identities = 308/313 (98%), Gaps = 3/313 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctctttgctagtgtagctcttttttccccccagggactt---tacagagcag 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 ggaattctctctttgctagtgtagctcttttttccccccagggacttctttacagagcag 263
Query: 61 ctgcccagcccttttttaggagcaaaagctttgccacactttaggctcagctgtttggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgcccagcccttttttaggagcaaaagctttgccacactttaggctcagctgtttggtt 323
Query: 121 tcctcccttgagcaatatggtaacaatgtctgtctgttattaccagtgctctgagagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcctcccttgagcaatatggtaacaatgtctgtctgttattaccagtgctctgagagtat 383
Query: 181 gtgtcatctttcccaggggagtcttgaacacagccaccctggaagggagagcccctctgt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 gtgtcatctttcccaggggagtcttgaacacagccacccgggaagggagagcccctctgt 443
Query: 241 gcccctgtgtttgccgtgtgccatttacatgctgagagcatgtgatttggcctaacctct 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 gcccctgtgtttgccgtgtgccatttacatgctgaaagcatgtgatttggcctaacctct 503
Query: 301 acaccatccatgg 313
|||||||||||||
Sbjct: 504 acaccatccatgg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 716
Length adjustment: 9
Effective length of query: 304
Effective length of database: 707
Effective search space: 214928
Effective search space used: 214928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_d11.g1 MSMg01no063_d11.g1 CHROMAT_FILE:
MSMg01no063_d11.g1 PHD_FILE: MSMg01no063_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:29 2005
(282 letters)
>mm_chr10_82342188_82342869
Length = 682
Score = 526 bits (272), Expect = e-154
Identities = 278/280 (99%)
Strand = Plus / Minus
Query: 1 tttcctaatccaggaaaggaaccaagcagacggccagtcggggcctgtttcacccacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tttcctaatccaggaaaggaaccaagcagacggccagtcggggcctgtttcacccacctg 421
Query: 61 ctgatgcagtactctttgtctccagggatgcccaggtagcggggcctctcacctgtggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctgatgcagtactctttgtctccagggatgcccaggtagcggggcctctcacctgtggcg 361
Query: 121 atgaggaaccgctctgctgaatagattttttctttacctttgttatttgttgcctgcaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 360 atgaggaaccgctctgctgaatagattttttctttacctttgttatttgtcgcctgcaaa 301
Query: 181 ggaaacaatgtcaatcccaatggaggactagcccttagaatctgtgcttagcagagggca 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 300 ggaaacaatgtcaatcccaatggaggactagcccttagaacctgtgcttagcagagggca 241
Query: 241 cttacagtgtctccctcagttcccagaacagtaagagaaa 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cttacagtgtctccctcagttcccagaacagtaagagaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
