Query= MSMg01no063_l06.b1 MSMg01no063_l06.b1 CHROMAT_FILE:
MSMg01no063_l06.b1 PHD_FILE: MSMg01no063_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:10 2005
(335 letters)
>mm_chr10_128594376_128595110
Length = 735
Score = 598 bits (309), Expect = e-175
Identities = 326/335 (97%), Gaps = 6/335 (1%)
Strand = Plus / Minus
Query: 1 ggggaagaaggggtgaattgaaggctgaaaatttgcttgctggtaaaatgcttgctatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 ggggaagaaggggtgaattgaaggctgaaaatttgcttgctggtaaaatgcttgttatat 362
Query: 61 gagctcaagagtcagagtttagatctagaacccacatagatgcaggatgggcatagtggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagctcaagagtcagagtttagatctagaacccacatagatgcaggatgggcatagtggt 302
Query: 121 ttactcaggaaagacaggggagcaccagagcaagctgctatggagactagtatatcactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttactcaggaaagacaggggagcaccagagcaagctgctatggagactagtatatcactg 242
Query: 181 agcttccggctttgacctaacacactaatgtctggcctaagcacgcacacacacacagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 agcttccggctttgacctaacacactaatgtctggcctaagcacgcacacacacacacag 182
Query: 241 acacacacacacatccatgcacttgcacttgcacttgcactcatgcacacatatatatgt 300
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 181 acacacacacacatcca------tgcacttgcacttgcactcatgcacacatatacatgt 128
Query: 301 gcaaacagacataggtgcatatacaatacacacac 335
|||||||||||||||||||||||||||||||||||
Sbjct: 127 gcaaacagacataggtgcatatacaatacacacac 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_l06.g1 MSMg01no063_l06.g1 CHROMAT_FILE:
MSMg01no063_l06.g1 PHD_FILE: MSMg01no063_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:10 2005
(291 letters)
>mm_chr10_128502284_128502974
Length = 691
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Plus
Query: 1 tttgtcatttctgacctcagaatgatctcaaagccctcaacagccttgattgtatctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtcatttctgacctcagaatgatctcaaagccctcaacagccttgattgtatctgtc 260
Query: 61 catcttggtgacatggtaattactttggaatttagaatcatcagtggccattctaatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcttggtgacatggtaattactttggaatttagaatcatcagtggccattctaatgat 320
Query: 121 ttagagggcagtggaagaatggtgtcttacggttttattattgtgaagagacactatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagagggcagtggaagaatggtgtcttacggttttattattgtgaagagacactatgac 380
Query: 181 tgaggcaacttttattaaggcaaccatttaattggtgctggatcttaattacagaggttc 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tgaggcaacttttattaaggcaaccatttaattggtgctagatcttaattacagaggttc 440
Query: 241 agtctatcatcctcatgaagtcatccaggaggagactgtcttcaacaggc 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtctatcatcctcatgaagtcatccaggaggagactgtcttcaacaggc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
