Query= MSMg01no063_o21.b1 MSMg01no063_o21.b1 CHROMAT_FILE:
MSMg01no063_o21.b1 PHD_FILE: MSMg01no063_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:29 2005
(629 letters)
>mm_chr10_52291390_52292418
Length = 1029
Score = 849 bits (439), Expect = 0.0
Identities = 448/451 (99%)
Strand = Plus / Minus
Query: 179 caggaccactgcagtcataaagccacagcagctgtgactgcctgcatgagatcaaatcgg 238
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 caggaccactacagtcataaagccacagcagctgtgactgcctgcatgagatcaaatcgg 970
Query: 239 acaacattctagcatggaaggggaagaaactctagagcacccatctataactgaagcact 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 acaacattctagcatggaaggggaagaaactctagagcacccatctataactgaagcact 910
Query: 299 atggagagttgatggttccttgacgcaagttgagtcaattctctcttaagtgtatgactc 358
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 909 atggagagttgatggttccttgaggtaagttgagtcaattctctcttaagtgtatgactc 850
Query: 359 ctggaaggtccaccatgctccagtagatggctctgcacttaggagtataagaagagctca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ctggaaggtccaccatgctccagtagatggctctgcacttaggagtataagaagagctca 790
Query: 419 attggactcagtagttaggaaaaaaaaccagtacacaatatcatgggggctagcagattt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 attggactcagtagttaggaaaaaaaaccagtacacaatatcatgggggctagcagattt 730
Query: 479 aggacaagttaggagtagggggttaaaatgagcaaaatacaatgtatagaattctcaaat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 aggacaagttaggagtagggggttaaaatgagcaaaatacaatgtatagaattctcaaat 670
Query: 539 tttaatagaagtattttttaaagatatgctgaattggaacccacccttatgacctcattt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tttaatagaagtattttttaaagatatgctgaattggaacccacccttatgacctcattt 610
Query: 599 taccttaattcatcctctaagagtcatgtct 629
|||||||||||||||||||||||||||||||
Sbjct: 609 taccttaattcatcctctaagagtcatgtct 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_o21.g1 MSMg01no063_o21.g1 CHROMAT_FILE:
MSMg01no063_o21.g1 PHD_FILE: MSMg01no063_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:29 2005
(593 letters)
>mm_chr10_52225364_52226356
Length = 993
Score = 565 bits (292), Expect = e-165
Identities = 313/320 (97%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 275 cacattttttt-attattctttatctttccccatgtctttccaaagttagttttctctac 333
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cacattttttttattattctttatctttccccatgtctttccaaagttagttttctctac 534
Query: 334 tcaccaccatctccctcaagcttctcaatagatactgactattcactgcctaatcattct 393
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 535 tcaccaccatctcccttaagcttctcaatagatactgactattcactgcctaatcactct 594
Query: 394 tgcctacaccccccttcccccacccagagagcttgtctccatcctatgggaccttcctct 453
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgtctacaccccc-ttcccccacccagagagcttgtctccatcctatgggaccttcctct 653
Query: 454 gactatttccttattcaacgtctgtgtcaggacctattcagtagaaaaccaagataaaag 513
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 654 gactatttccttattcaacgtctgtgtcaggacctattcagttgaaaaccaagataaaag 713
Query: 514 gcaagtggttgataatagttgttcaataacaaaatttaaaagtggaagcacactgggtca 573
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 714 gcaagtggttgataatagttgttcaataacaaaatttaaaagtggaagcacactggttca 773
Query: 574 tgtaggtttttgcttttcta 593
||||||||||||||||||||
Sbjct: 774 tgtaggtttttgcttttcta 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
