Query= MSMg01no064_a20.b1 MSMg01no064_a20.b1 CHROMAT_FILE:
MSMg01no064_a20.b1 PHD_FILE: MSMg01no064_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:41 2005
(319 letters)
>mm_chr10_124190375_124191093
Length = 719
Score = 590 bits (305), Expect = e-173
Identities = 314/317 (99%)
Strand = Plus / Minus
Query: 1 tgtagcttttcagggagttttataaagatgctcaatactttaatgacgggtttatttatt 60
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 517 tgtagcttttcagggagttttataaagatgctcaatactttaatgactggcttatttatt 458
Query: 61 tattttttgctagttttggcatttattataaattgatgttcaagaaacaacaaacaagtt 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 457 tattttttgctagttttggcattcattataaattgatgttcaagaaacaacaaacaagtt 398
Query: 121 gtttttaaaaactctttttttacatcatttattctgtttgtgtgcatctatgtcttggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtttttaaaaactctttttttacatcatttattctgtttgtgtgcatctatgtcttggtg 338
Query: 181 tatatgtggaggtgagagcacaaattggagtacttaattcttgccttccacctcatggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tatatgtggaggtgagagcacaaattggagtacttaattcttgccttccacctcatggtt 278
Query: 241 tcgcagggtgcagcttgggttgtgaaggttggtgccagctttgcttttctgtggagtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcgcagggtgcagcttgggttgtgaaggttggtgccagctttgcttttctgtggagtcat 218
Query: 301 ttaaccatcccatagtg 317
|||||||||||||||||
Sbjct: 217 ttaaccatcccatagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_a20.g1 MSMg01no064_a20.g1 CHROMAT_FILE:
MSMg01no064_a20.g1 PHD_FILE: MSMg01no064_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:41 2005
(382 letters)
>mm_chr10_124059984_124060764
Length = 781
Score = 638 bits (330), Expect = 0.0
Identities = 369/384 (96%), Gaps = 5/384 (1%)
Strand = Plus / Plus
Query: 1 ataatcaaaagtgagcaaatatacagggagacacaataacctccttcatctaaagggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ataatcaaaagtgagcaaatatacagggagacacaataacctccttcatctaaagggtta 260
Query: 61 --cccgaatctttaagcacagaaagtgggattgcaagtactatgaccacacaattggtag 118
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 at---gaatctttacgcacagaaagtgggattgcaaatactatgaccacacaattggtag 317
Query: 119 accactgtgtatcaatgtgctaatggaaaaaaatccctggctgtctacctaagagatgca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 accactgtgtatcaatgtgctaatggaaaaaaatccctggctgtctacctaagagatgca 377
Query: 179 atggctcacacgcagcaccgatgcattgtatataaatgtaagcactctcttacaccatct 238
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 atggctcacacgcagcaccgatgcattgtatataaatgtaagcactcttttacaccatct 437
Query: 239 ctaaagtctacttatcaagtatttgggagtagcttttgtaatttactacaataaattggt 298
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 438 ctaaagtctacttatcaagtatttgggagtagcgtttgtaatttactacaataaattgat 497
Query: 299 aagtatatacagtgggtgttttgctcttgatggtgtatattctagaagctgagcctaaac 358
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 498 aagtatatacagtgagtgttttgctcttgatagtgtatattctagaagctgagcctaaac 557
Query: 359 acacttggttctgtcaattgtgta 382
||||||||| ||||||||||||||
Sbjct: 558 acacttggtcctgtcaattgtgta 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 781
Length adjustment: 9
Effective length of query: 373
Effective length of database: 772
Effective search space: 287956
Effective search space used: 287956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
