Query= MSMg01no064_m15.b1 MSMg01no064_m15.b1 CHROMAT_FILE:
MSMg01no064_m15.b1 PHD_FILE: MSMg01no064_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:00 2005
(583 letters)
>mm_chr10_73253840_73254821
Length = 982
Score = 1081 bits (559), Expect = 0.0
Identities = 577/583 (98%), Gaps = 1/583 (0%)
Strand = Plus / Minus
Query: 1 ttttaatgccccttttaaaaatggcaggagatgtgcaaactgcacggaggcacttatatg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttttaatgcaccttttaaaaatggcaggagatgtgcaaactgcacggaggcacttatatg 723
Query: 61 tactttgtttagagtctaggactgagttcttgggactgcgtggtcgtgaacagctcttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tactttgtttagagtctaggactgagttcttgggactgcgtggtcgtgaacagctcttga 663
Query: 121 acttcaacccccgcgggttcctattaaattttcacctgtaacagtatttctttcatagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 acttcaacccccgcgggttcctattaaattttcacctgtaacagtatttctttcatagct 603
Query: 181 gggagaacagactcatagctgcttagtgactgtaaatgctgatgatagcagggtcgtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gggagaacagactcatagctgcttagtgactgtaaatgctgatgatagcagggtcgtgcc 543
Query: 241 aggactgttctgtattctcctgtgatcacagcacaccagagcattagcttcctcccgtgc 300
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 542 aggactgttctgtattctcctgtgatcacagcacaccagagcagcagcttcctcccgtgc 483
Query: 301 cctggcactttttatgttaaagtaatctaagcttagagaggcctaggcgatcacttgcag 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cctggcactttttatgttaaactaatctaagcttagagaggcctaggcgatcacttgcag 423
Query: 361 gaagcttttccctccacgtagtcttctctgatcgtgaagcatgtctgactcctctacttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaagcttttccctccacgtagtcttctctgatcgtgaagcatgtctgactcctctacttt 363
Query: 421 gctcccttggagcaatttatcatgccactgaaaaataagtctgggaaccacaagtgcggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gctcccttggagcaatttatcatgccactgaaaaataagtctgggaaccacaagtgcggc 303
Query: 481 atgaagttatatacacgtcgaccttacgttacaccttggaaccttactccagcaatgttt 540
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 302 atgaagttatatacacgtcgacctcacgttacaccttggaac-ttactccagcaatgttt 244
Query: 541 tcgactgtagaagactaacatggtcttatggcccaccaagcgt 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcgactgtagaagactaacatggtcttatggcccaccaagcgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 982
Length adjustment: 10
Effective length of query: 573
Effective length of database: 972
Effective search space: 556956
Effective search space used: 556956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_m15.g1 MSMg01no064_m15.g1 CHROMAT_FILE:
MSMg01no064_m15.g1 PHD_FILE: MSMg01no064_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:00 2005
(281 letters)
>mm_chr10_73146788_73147468
Length = 681
Score = 520 bits (269), Expect = e-152
Identities = 278/281 (98%)
Strand = Plus / Plus
Query: 1 ggacccttaccccttctgaacatgagaataagaggtgaagcaatcacccatggaaaagaa 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggacccttacatcttctgaacatgagaataagaggtgaagcaatcacccatggaaaagaa 260
Query: 61 tttaattctccatggcacaattttcaaagttattacagggtcattccaaagtaggagagc 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 tttaattctccatggcacaattttcagagttattacagggtcattccaaagtaggagagc 320
Query: 121 gacaatatacttgccataagaaagagaaaacagaatccacactgaattgtgaatttaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaatatacttgccataagaaagagaaaacagaatccacactgaattgtgaatttaata 380
Query: 181 ttactcatatataatatagaggtttacaatttgatcacaggttttgtttttgtgttgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttactcatatataatatagaggtttacaatttgatcacaggttttgtttttgtgttgttg 440
Query: 241 ttgttgtcaccagagggcactaattaagaggagcacacagc 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttgtcaccagagggcactaattaagaggagcacacagc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
