Query= MSMg01no065_e07.b1 MSMg01no065_e07.b1 CHROMAT_FILE:
MSMg01no065_e07.b1 PHD_FILE: MSMg01no065_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:43 2005
(308 letters)
>mm_chr5_3332255_3332960
Length = 706
Score = 375 bits (194), Expect = e-108
Identities = 282/324 (87%), Gaps = 28/324 (8%)
Strand = Plus / Minus
Query: 1 agccccacccctttcttaacctttttgagctctccctctgccccatctactgtttgacac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 444 agccccacccctttcttaaccttttttagctctccctctgccccatctactgtttgacac 385
Query: 61 tgaagttgtgtgagtctgaaactgagttttgtattttggagccaccttacttatgaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaagttgtgtgagtctgaaactgagttttgtattttggagccaccttacttatgaggtc 325
Query: 121 ctcactc-tcgacacaatagtagctttcgagagcagcagctcagaacccgaagggagtac 179
||||||| | | ||||| ||||| ||||||| |||||||||||||||||||||| |||
Sbjct: 324 ctcactctttgtcacaagagtagatttcgag---agcagctcagaacccgaagggaatac 268
Query: 180 tcctatctatgggggagttggttctctctccagctttctagaaaattctttaatactctc 239
|| | ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcatgtctat-ggggagttgattctctctccagctttctagaaaattctttaatactctc 209
Query: 240 tcccctccttc-ttt---gtctccagttcctgcctccct-----------cttgattacc 284
| |||| || ||| ||||| |||||||| | | ||| |||| |
Sbjct: 208 t---ctccctcatttcaagtctctagttcctg--t---taatcaagagggcttaattaac 157
Query: 285 acaatgctcttttcttttgagttc 308
||||||||||| ||||||||||||
Sbjct: 156 acaatgctcttctcttttgagttc 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 706
Length adjustment: 9
Effective length of query: 299
Effective length of database: 697
Effective search space: 208403
Effective search space used: 208403
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_e07.g1 MSMg01no065_e07.g1 CHROMAT_FILE:
MSMg01no065_e07.g1 PHD_FILE: MSMg01no065_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:43 2005
(337 letters)
>mm_chr10_22139221_22139957
Length = 737
Score = 596 bits (308), Expect = e-175
Identities = 329/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 1 tccctgaagg-catctctcctctggcaggacaagcacacagaggtctgggtgtctgctct 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tccctgaaggccatctctcctctggcaggacaagcacacagaggtctgggtgtctgctct 598
Query: 60 gccctctggccgaagatgaaggctcaaagggaccctgtttccgaacctatgtagtttctg 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gccctctggccaaagatgaaggctcaaagggaccctgtttccgaacctatgtagtttctg 538
Query: 120 ccgcccatgcgtgctctcctgcgcagactggtctccttgagacccgggatacaaggtcaa 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ccgcccatgcgtgctctcctgtgcagactggtctccttgagacccgggatacaaggtcaa 478
Query: 180 tgatctcacttctgattattgactctgcactgatgctaaatgccccttggtatgatggca 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 477 tgatctcacttctgattattgactctgcactgatgctaaacgccccttggtatgatggca 418
Query: 240 ttgctttctatgcttcagtccctgaacctacagaagcaagtcattacagatggcaactga 299
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 417 ttgctttcaatgcttcagtccctgaacctacagaagcaagccattacagatggcaactga 358
Query: 300 tgcaccttgcctggtcaacatataatcagttacagg 335
||||||||||||||||||| ||||||||||||||||
Sbjct: 357 tgcaccttgcctggtcaacgtataatcagttacagg 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
