Query= MSMg01no066_p08.b1 MSMg01no066_p08.b1 CHROMAT_FILE:
MSMg01no066_p08.b1 PHD_FILE: MSMg01no066_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:55 2005
(376 letters)
>mm_chr10_13386692_13387467
Length = 776
Score = 727 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Minus
Query: 1 tctccaggaaaacatcaccataaaatcaggtaggttggagagagtagttctcagtggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tctccaggaaaacatcaccataaaatcaggtaggttggagagagtagttctcagtggaaa 517
Query: 61 cgaatcacttgcaactggtttaggcatgtgtcgggagatgtgctaaaggaaaactctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cgaatcacttgcaactggtttaggcatgtgtcgggagatgtgctaaaggaaaactctctg 457
Query: 121 aagttgattattggcctgccttcgtggataaatcactcagagatttgtgatttagaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aagttgattattggcctgccttcgtggataaatcactcagagatttgtgatttagaacca 397
Query: 181 ggaagaaaacacattccctcatgacctcatgacggaattcattccgaaaggcttgcacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggaagaaaacacattccctcatgacctcatgacggaattcattccgaaaggcttgcacaa 337
Query: 241 tttgcctgttccctagggatgggtggagggacttgtaaccttgaaaatattcttgtatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tttgcctgttccctagggatgggtggagggacttgtaaccttgaaaatattcttgtatgg 277
Query: 301 agtacaggaaaatgttatatacttccacatgaagagtaacactggaaaagcttttgttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 agtacaggaaaatgttatatacttccacatgaagagtaacactggaaaagcttttgttgc 217
Query: 361 tgcttatttgatttgc 376
||||||||||||||||
Sbjct: 216 tgcttatttgatttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_p08.g1 MSMg01no066_p08.g1 CHROMAT_FILE:
MSMg01no066_p08.g1 PHD_FILE: MSMg01no066_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:55 2005
(242 letters)
>mm_chr10_13228901_13229543
Length = 643
Score = 404 bits (209), Expect = e-117
Identities = 233/241 (96%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 1 attctttatctctccaat-cacttggttcaggtttccatgccacccgcctgtacctgatc 59
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttatctctagaattcacttggttcaggtttccatgccacccgcctgtacctgatc 260
Query: 60 tttccagcctctcatttttcagtgtccagcttaattctccacctgaaatttggccatttt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tttccagcctctcatttttcagtgtccagcttaattctccacctgaaatttggcgatttt 320
Query: 120 ttaacctgcctttcttctatattcacaactgtcttatatagggtttctattgctgtgaag 179
|||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 321 ttaacctgcctttcttctatattcacaactgtcttagatagggtttatattgttgtgaag 380
Query: 180 agacactaggaacatggcaattcttataaaggaaaaacatttaactggggctgtcttaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 agacactaggaacatggcaattcttataaaggaaaaacatttaactggggctggcttaca 440
Query: 240 g 240
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
