Query= MSMg01no067_c19.b1 MSMg01no067_c19.b1 CHROMAT_FILE:
MSMg01no067_c19.b1 PHD_FILE: MSMg01no067_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:12 2005
(190 letters)
>mm_chr10_93790477_93791067
Length = 591
Score = 317 bits (164), Expect = 2e-91
Identities = 182/188 (96%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcaaag-atatctctactatgaaaatgctaagaccaactgaagtagttttata 62
||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattctcaaagaataaatctactatgaaaatactaagaccaactgaagtagttttata 263
Query: 63 aaatacgacatacccaccgataacaaggacagagtgtgtgtgcctgaacatggacagatc 122
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaatacgacatacccaatgataacaaggacagagtgtgtgtgcctgaacatggacagatc 323
Query: 123 tctagtgagcatgaaggagcacaggctagaattctgtttctgtcaagttccagggtaggg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctagtgagcatgaaggagcacaggctagaattctgtttctgtcaagttccagggtaggg 383
Query: 183 aacaatag 190
||||||||
Sbjct: 384 aacaatag 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 591
Length adjustment: 8
Effective length of query: 182
Effective length of database: 583
Effective search space: 106106
Effective search space used: 106106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_c19.g1 MSMg01no067_c19.g1 CHROMAT_FILE:
MSMg01no067_c19.g1 PHD_FILE: MSMg01no067_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:12 2005
(288 letters)
>mm_chr10_93960216_93960903
Length = 688
Score = 466 bits (241), Expect = e-136
Identities = 275/287 (95%), Gaps = 3/287 (1%)
Strand = Plus / Minus
Query: 1 caggacagccagggctatacagagaaactctgtctcaggggaaaaaaaaccgaatgtgtg 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 457 caggacagccagggctatacagagaaactctgtctcagggggaaaaaa--tgaatgtgtg 400
Query: 61 gatgcatgtatgattgggtgtgagcaaataaaatcctggccacccaacctgattggtgat 120
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 399 gatgcatatatgattgggtgtgagcaaataaaatcctggccacccaacctaattggtgat 340
Query: 121 gggaattccatgagcttctggctctttcctctccaatgcaattatttaagtgacaatatg 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gggaattccacaagcttctggctctttcctctccaatgcaattatttaagtgacaatatg 280
Query: 181 acatctacttttccgcctgccttacctgaaaaaaacaaacaaacaagcaaacaaacaaac 240
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 279 acatctacttttccgcctgcctgacctgaaaaaa-caaacaaacaagcaaacaaacaaac 221
Query: 241 aaaatgtcctgtgtacagtttacctcctactgtaatgcccatggaga 287
||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 220 aaaatgtcctgagtacagtttacctcccactgtaatgcccatggaga 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
