Query= MSMg01no068_g14.b1 MSMg01no068_g14.b1 CHROMAT_FILE:
MSMg01no068_g14.b1 PHD_FILE: MSMg01no068_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:50 2005
(360 letters)
>mm_chr10_11724455_11725212
Length = 758
Score = 615 bits (318), Expect = e-180
Identities = 349/362 (96%), Gaps = 6/362 (1%)
Strand = Plus / Plus
Query: 1 gcctctataagtatctacactcagatgtacacacttaaacacaaacatacactacatgca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 gcctctataagtatctacactcagatgtacacacttaaacacaaacacacactacatgca 260
Query: 61 tatattttttt--aaaaaaaagtactaaatgtagtatgatgtaaaacgtcaagttcagca 118
|||| ||| ||||||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 261 tata----tttaaaaaaaaaagtaataaatgtagtatgatataaaatgtcaagttcagca 316
Query: 119 cttgcctatgtgctgtaatttcagggaaggccaattgtttaacacagcactagatcagag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cttgcctatgtgctgtaatttcagggaaggccaattgtttaacacagcactagatcagag 376
Query: 179 caattctcccagcttttaatgccctgcctaaaatgttagcagttccataatgtttaactg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caattctcccagcttttaatgccctgcctaaaatgttagcagttccataatgtttaactg 436
Query: 239 gtcaaacctattatcgttaatgtattcatgacttcagagtatttgagttgccagggtcca 298
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtcaaacctattagcattaatgtattcatgacttcagagtatttgagttgccagggtcca 496
Query: 299 tttaacataaacaagtcagccctgtcattacccagaccttgtatctgggactgaaaggtg 358
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 497 tttaacataaacaagtcagccctgtcattacccggaccttgtatctgggactgaaaggtg 556
Query: 359 ga 360
||
Sbjct: 557 ga 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 758
Length adjustment: 9
Effective length of query: 351
Effective length of database: 749
Effective search space: 262899
Effective search space used: 262899
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_g14.g1 MSMg01no068_g14.g1 CHROMAT_FILE:
MSMg01no068_g14.g1 PHD_FILE: MSMg01no068_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:50 2005
(428 letters)
>mm_chr10_11894431_11895259
Length = 829
Score = 775 bits (401), Expect = 0.0
Identities = 422/431 (97%), Gaps = 5/431 (1%)
Strand = Plus / Minus
Query: 1 atttggttttatagacgctctctccattgtccttacatttttcattttgcctctgacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atttggttttatagacgctctctccattgtccttacatttttcattttgcctctgacagc 752
Query: 61 ttataacttaattttgagctggccagtgtccaaagctttgtacttgggaagtgccgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttataacttaattttgagctggccagtgtccaaagctttgtacttgggaagtgccgagga 692
Query: 121 aatggaaaagaccttatctttggagtcaggcagatctgccttcaaacatggattctgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aatggaaaagaccttatctttggagtcaggcagatctgccttcaaacatggattctgcac 632
Query: 181 ttgaccttgactgactcagagcctgggatggagctgtcctgagtgaggggctgtgcactt 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttgaccttgtctgactcagagcctgggatggagctgtcctgagtgaggggctgtgcactt 572
Query: 241 atcattgttcatagaggaaagtgatgggtgtttgggattcatccccatttttgtcttact 300
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 571 atcattgggcatagaggaaagtgatgggtgtttgggattcatccccacttttgtctt--t 514
Query: 301 ttt---atcctctttctcagttacaaaacaacatcttaaccatgaacttttttgtgattt 357
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttttttatcctctttctcagttacaaaacaacatcttaaccatgaacttttttgtgattt 454
Query: 358 aatcttagttgatataacttcacagtcatttggagaaaataaactaaaagtctctgaaca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aatcttagttgatataacttcacagtcatttggagaaaataaactaaaagtctctgaaca 394
Query: 418 tcaattattaa 428
|||||||||||
Sbjct: 393 tcaattattaa 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
