Query= MSMg01no070_d12.b1 MSMg01no070_d12.b1 CHROMAT_FILE:
MSMg01no070_d12.b1 PHD_FILE: MSMg01no070_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:12 2005
(588 letters)
>mm_chr10_71164641_71165628
Length = 988
Score = 1079 bits (558), Expect = 0.0
Identities = 579/586 (98%), Gaps = 1/586 (0%)
Strand = Plus / Minus
Query: 4 gaattcagttaatgacccgccagcaggttacaatgctacctctggtccagactctattac 63
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 596 gaattcagttaatgaccagccagcaggttacaatgctacctttggtccagactctattac 537
Query: 64 aagtacaacatgagttttgccaatattcctctacctctattaacagtcttgtgtgtttgt 123
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aaatacaacgtgagttttgccaatattcctctacctctattaacagtcttgtgtgtttgt 477
Query: 124 tttgcatttcacactaagctgtataaatgctccacatagacaagaattgatcttattgta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tttgcatttcacactaagctgtataaatgctccacatagacaagaattgatcttattgta 417
Query: 184 gacagtcttttaagaacaatacagtcatgtggcaacttgaattgtaagacatcaaaagaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gacagtcttttaagaacaatacagtcatgtggcaacttgaattgtaagacatcaaaagaa 357
Query: 244 ttgtaagacatttcacgatgaaaaatacccataatctctcccatgtctttgccaacaatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttgtaagacatttcacgatgaaaaatacccataatctctcccatgtctttgccaacaatc 297
Query: 304 tactcctaagatgtcatctcatccagcagtactctcaaaacacttgctaacatcaatgtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tactcctaagatgtcatctcatccagcagtactctcaaaacacttgctaacatcaatgtg 237
Query: 364 ttacatgtaaattctacaccacagaaataccctgagaatcttggggatcaaatatgggct 423
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 236 ttacatgtaaattctacaccacagacataccctgagaatcttggggatcaaatatgggct 177
Query: 424 cttgaagcttttacccagatgtgatacaggtcaccaatgcataattcatcccatggacaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 cttgaagcttttacccagatgtgatacaggtcaccaatgcataattcatcccatggacaa 117
Query: 484 gcctactaccactaggtagactgctataacatgcatgcaaa-gaagaacagtaggtgtga 542
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 116 gcctactaccactaggtagactgctataacatgcatgcaaaggaagaacagtaggtgtga 57
Query: 543 ataatcacccagaacaccctgggagttgggaatctgtcacctccca 588
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 56 ataatcaccccgaacaccctgggagttgggaatctgtcacctccca 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_d12.g1 MSMg01no070_d12.g1 CHROMAT_FILE:
MSMg01no070_d12.g1 PHD_FILE: MSMg01no070_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:12 2005
(210 letters)
>mm_chr10_70987243_70987854
Length = 612
Score = 368 bits (190), Expect = e-106
Identities = 206/212 (97%), Gaps = 2/212 (0%)
Strand = Plus / Plus
Query: 1 aattctttcatgacccaaatatttatttggctggtgaggttgaatatcttgatatttact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctttcatgacccaaatatttatttggctggtgaggttgaatatcttgatatttact 260
Query: 61 ttccttaattg--ttttttttggggggggggatttttacttactgctgcttggacagcaa 118
|| |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 261 tttcttaattgttttttttttgggggggggaattgttacttactgctgcttggacagcaa 320
Query: 119 tctgagttagtcctctgttttggaggtctaatgtcatgctttgcgaaggttattacttgg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgagttagtcctctgttttggaggtctaatgtcatgctttgcgaaggttattacttgg 380
Query: 179 ccttggccttagtattaattatccctaaatta 210
|||||||||||||||||| |||||||||||||
Sbjct: 381 ccttggccttagtattaaatatccctaaatta 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 612
Length adjustment: 9
Effective length of query: 201
Effective length of database: 603
Effective search space: 121203
Effective search space used: 121203
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
