XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
AAATATTTTCAAGATAATGACCAAAATGTATTAACCAAACCCCAGGAAAA
GTGCAATAGAGCCATGACTTCAGCTAATCTCTTTACCTTGTTCTGATTCC
TTATATTTATTCTGACAGACAGTGAGAAGGTAGAGAATATTTGCTTAAAT
GAAATGATCCAGTTTTTTTTTTTCCCAAATAGCATCTTGCTTCTCATTTC
CAATTGGAGGGATAATTTGATGAAACTAGTGTTGTGCTGACAGTCAGTAA
AGGGCTATGTCTAAGAACAAGAGATCTGGGGTCACAGGAAATGGAATGCC
AAAGGGTAATCACTGATGGCAGCTGCATTGCTGTGCTCAAGCTCATTAAG
CTTTGGGGAACACAGGCATGTGATTTGTATGAGAAGGATAAGAGTTAGAA
CTACCTATCATGGTTTTTGTGGAGATGAGGTAGTGCAAGTGAGTATTAAG
CTCTTTTGGAGACTGTGAGAGATGATAACACACAGGCTCTCTTGTTTAGT
GATGGCAGTAACCTATAGTAGCATAAGAGCAATAGTGATAGTTGTGGTTG
AAAGCTATATTTCCAAAAACCCAAGCTAAATCCTGACCCTCACACCTGGA
TCCAAAGCCAATGCCTGTACGACTTGCTCATGTTGTGAAATTTAA

TGCAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCTGTTTATCTCTGTACTCCATTTTTAAT
TGGACTTTGGGGTTTGTTGGTTTCTAGTTTCTTGAGTTCTTTATGTATTT
TGGATATTAGTCCTGTCTTGGATGCAGGGTTGGTGAAGGTTTTTGGTTCT
AGGTTTTGGGTTTTTTTTAATTGTTTGTTTGGTAGGTTTTTGTTGATGTT
ATCTCTTCCCCTTTATCCCTTTCTTTTTTTTTTCTCTCCTTTTTTTTTTT
CTCACCCCCTATTTTTTTTACTATTTTCTCGTACCTTTCTTTTATATTCT
TATTTCTCTATTATTTCTTTCATTTGTTAAATTTTTCTCTTTTTTGCTTC
ATGTCTTTTTAACTCCACCACCTTTTATAAATATTTTTTTTTCTTTTTAC
TTCCTTTACTATCCCTTTTTCAATTTCTATTTCCTTTTTTTTATGAACAT
CTTTACTTTTTCTTCTCCTTTTTTTTCTTTTTACCCTCTCTTTCAGTCCT
ATTACTTGCTTCTTTGTTTCGTCTTTTTATTTCTTATTTCGTTTTATTTA
TACAACTTTCTCTATTTTACATTCTCTCTTTTATTTCTCAAACCCTACCT
TTTTTCGCTTTTTTTACTTTCCACACTTTTTTTTTCTTCCCCTTTTTAAT
TTTCATTTCCTTTTTCTTTTTTTCCTT

Query= MSMg01no070_f22.b1 MSMg01no070_f22.b1 CHROMAT_FILE:
MSMg01no070_f22.b1 PHD_FILE: MSMg01no070_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:24 2005
         (579 letters)



>mm_chr10_96390466_96391446
          Length = 981

 Score = 1038 bits (537), Expect = 0.0
 Identities = 570/587 (97%), Gaps = 11/587 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaaaatattttcaagataatgaccaaaatgtattaaccaaaccccaggaaaagt 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggaattcaaaatatttttaagataatgaccaaaatgtattaaccaaaccccaggaaaagt 254

                                                                       
Query: 64  gcaatagagcca---------tgacttcagctaatctctttaccttgttctgattcctta 114
           ||||||||||||         |||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gcaatagagccaattcattattgacttcagctaatctctttaccttgttctgattcctta 314

                                                                       
Query: 115 tatttattctgacagacagtgagaaggtagagaatatttgcttaaatgaaatgatccag- 173
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| 
Sbjct: 315 tatttattctgacagacagtgagaaggtagaaaatatttgcttaaatgaaatgatccagt 374

                                                                       
Query: 174 -tttttttttttcccaaatagcatcttgcttctcatttccaattggagggataatttgat 232
            |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 375 ttttttttttttcccaaatagcatcttacttctcatttccaattggagggataatttgat 434

                                                                       
Query: 233 gaaactagtgttgtgctgacagtcagtaaagggctatgtctaagaacaagagatctgggg 292
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaaactggtgttgtgctgacagtcagtaaagggctatgtctaagaacaagagatctgggg 494

                                                                       
Query: 293 tcacaggaaatggaatgccaaagggtaatcactgatggcagctgcattgctgtgctcaag 352
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tcacaggaaacggaatgccaaagggtaatcactgatggcagctgcattgctgtgctcaag 554

                                                                       
Query: 353 ctcattaagctttggggaacacaggcatgtgatttgtatgagaaggataagagttagaac 412
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 555 ctcattaagctttggggaacacaggcatgtgatttgtatgagaaggataagaattagaac 614

                                                                       
Query: 413 tacctatcatggtttttgtggagatgaggtagtgcaagtgagtattaagctcttttggag 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tacctatcatggtttttgtggagatgaggtagtgcaagtgagtattaagctcttttggag 674

                                                                       
Query: 473 actgtgagagatgataacacacaggctctcttgtttagtgatggcagtaacctatagtag 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 actgtgagagatgataacacacaggctctcttgtttagtgatggcagtaacctatagtag 734

                                                          
Query: 533 cataagagcaatagtgatagttgtggttgaaagctatatttccaaaa 579
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cataagagcaatagtgatagttgtggttgaaagctatatttccaaaa 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 981
Length adjustment: 10
Effective length of query: 569
Effective length of database: 971
Effective search space:   552499
Effective search space used:   552499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)