Query= MSMg01no070_p02.b1 MSMg01no070_p02.b1 CHROMAT_FILE:
MSMg01no070_p02.b1 PHD_FILE: MSMg01no070_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:11 2005
(404 letters)
>mm_chr10_69882073_69882877
Length = 805
Score = 750 bits (388), Expect = 0.0
Identities = 400/404 (99%), Gaps = 1/404 (0%)
Strand = Plus / Plus
Query: 2 gaattcttcgtggttcgggtgtaagtgagcaaatgtgtgctttgacttctgtgagccccg 61
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcttcgtggttggggtgtaagtgagcaaatgtgtgctttgacttctgtgagccccg 261
Query: 62 gctttggggaaagctgtgacttttaca-aaatttctttccctctgcataatacactaaac 120
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 262 gctttggggaaagctgtgacttttagataaatttctttccctctgcataatacactaaac 321
Query: 121 aaatttaaattaactcttggggcaaatataattaaggcgctgcagatggttcttttgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaatttaaattaactcttggggcaaatataattaaggcgctgcagatggttcttttgttc 381
Query: 181 ctccggttgaccagaatatgctctaactgtggctttggatgaagcgattaagtcctgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctccggttgaccagaatatgctctaactgtggctttggatgaagcgattaagtcctgttt 441
Query: 241 ccatgggacccagtcctaaggtatttggaaagcacacattagcgattccgaggctcacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccatgggacccagtcctaaggtatttggaaagcacacattagcgattccgaggctcacag 501
Query: 301 gaagtttatttcttcagtagcttgtttagagaagatttcaaacgcggtgactacgcttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaagtttatttcttcagtagcttgtttagagaagatttcaaacgcggtgactacgcttcg 561
Query: 361 gcttttctgtgagccttttttgttcttctctaattatgctttta 404
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gtttttctgtgagccttttttgttcttctctaattatgctttta 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 805
Length adjustment: 9
Effective length of query: 395
Effective length of database: 796
Effective search space: 314420
Effective search space used: 314420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_p02.g1 MSMg01no070_p02.g1 CHROMAT_FILE:
MSMg01no070_p02.g1 PHD_FILE: MSMg01no070_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:11 2005
(445 letters)
>mm_chr10_70032808_70033652
Length = 845
Score = 808 bits (418), Expect = 0.0
Identities = 433/440 (98%), Gaps = 4/440 (0%)
Strand = Plus / Minus
Query: 1 ttgaggaaaatgaaatgccacgtaaaagggtaaatcatgactatatgcagagataaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttgaggaaaatgaaatgccacgtaaaagggtaaatcatgactatatgcagagataaaaat 586
Query: 61 caacagtaaagtcattagaggaaattgatcctgggctataaggatagttcaagagataat 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 caacagtaaactcattagaggaaattgatcctgggctataaggatagttcaagagataat 526
Query: 121 ccattatgagtcatttatattaaaagctatgcaaatgaagttgaaagtatcttggcgagg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 525 ccattatgagtcatttatattaaaagctatgcaaatgaagttgaaagtatcttggcaagg 466
Query: 181 gcagtggactttggagcagaaaggaaggctgtccccagcacacaattcagttattctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gcagtggactttggagcagaaaggaaggctgtccccagcacacaattcagttattctatg 406
Query: 241 tacagaagaataactagagtgtttaccaagctgggaagatccttccatagaagcagaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tacagaagaataactagagtgtttaccaagctgggaagatccttccatagaagcagaaga 346
Query: 301 atgtgttataagctctctatagttttctgctgcagtactacattccctaagtcaaacaga 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atgtgctataagctctctatagttttctgctgcagtactacattccctaagtcaaacaga 286
Query: 361 ttggtttagaaacttgtggagttgtttgaacactttaggcctgaaaagagtaaaaaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 285 ttggtttagaaacttgtggagttgtttgaacactttaggcctgaaaagagt----aaaaa 230
Query: 421 aaaaagttgtttgtttgttt 440
||||||||||||||||||||
Sbjct: 229 aaaaagttgtttgtttgttt 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
