Query= MSMg01no071_e08.b1 MSMg01no071_e08.b1 CHROMAT_FILE:
MSMg01no071_e08.b1 PHD_FILE: MSMg01no071_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:37 2005
(278 letters)
>mm_chr10_123372968_123373645
Length = 678
Score = 487 bits (252), Expect = e-142
Identities = 270/276 (97%)
Strand = Plus / Plus
Query: 3 gaattctttatagcctagctttcactaaggtaaaaatgatatttcacttaatttattttc 62
||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctttatagtctagttttcactaaggtaaaaatgatatttcacttaatttattttt 262
Query: 63 gtaagttcagcagatataaatgtagatctttggattcagaagaaatccagtgattgtgtg 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 gtaagttcagcagatataaatgtagatctttggattctgaagaaatccagtgattgtgtg 322
Query: 123 ctatgtgttaaggattatacaaacttattgtcagcaaaggcatcattttcttaaccagca 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttatgtgttaaggattatacaaacttattgtcagcaaaggcatcattttcttaaccagca 382
Query: 183 caggaacccagtatgtttgatttttgttaggttataaatttcctagtgaaaacatttaag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caggaacccagtatgtttgatttttgttaggttataaatttcctagtgaaaacatttaag 442
Query: 243 cttagagaaatttgaactctcatacagtcttaccat 278
|||||||||||||||||||||||| |||||||||||
Sbjct: 443 cttagagaaatttgaactctcataaagtcttaccat 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no071_e08.g1 MSMg01no071_e08.g1 CHROMAT_FILE:
MSMg01no071_e08.g1 PHD_FILE: MSMg01no071_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:37 2005
(311 letters)
>mm_chr10_123522331_123523042
Length = 712
Score = 596 bits (308), Expect = e-175
Identities = 311/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 1 ccctcattagtcctac-tctcacaatttcttctcaatttcgtatgaaacaaatacaattt 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccctcattagtcctacatctcacaatttcttctcaatttcgtatgaaacaaatacaattt 453
Query: 60 tactgagagtaagccactatattttctgtgtctctttttctaaataagacaaaataagat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tactgagagtaagccactatattttctgtgtctctttttctaaataagacaaaataagat 393
Query: 120 tagcagtgagctgaccctgagataagagtttatattaagtgacatttatttagcagttat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tagcagtgagctgaccctgagataagagtttatattaagtgacatttatttagcagttat 333
Query: 180 tgtacgattagatgttaatagtttgtaaaactgacaattattatactggcaggaaaatta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtacgattagatgttaatagtttgtaaaactgacaattattatactggcaggaaaatta 273
Query: 240 caaatttgttgcctagaaatgatagtgtaacattcttttaaaacatggcaattaatatta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 caaatttgttgcctagaaatgatagtgtaacattcttttaaaacatggcaattaatatta 213
Query: 300 attatttgactc 311
||||||||||||
Sbjct: 212 attatttgactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
