Query= MSMg01no071_l17.b1 MSMg01no071_l17.b1 CHROMAT_FILE:
MSMg01no071_l17.b1 PHD_FILE: MSMg01no071_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:14 2005
(210 letters)
>mm_chr10_79228403_79229012
Length = 610
Score = 400 bits (207), Expect = e-116
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1 tgtcaccatccagagggagagtgcagagaccagaaggaactacagcacctcttaccaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcaccatccagagggagagtgcagagaccagaaggaactacagcacctcttaccaccc 260
Query: 61 accccgtcgtcaccctgacagactctggctaattactccaccaccttctccgcaatggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accccgtcgtcaccctgacagactctggctaattactccaccaccttctccgcaatggta 320
Query: 121 gattggcttacaccaaactagctactacttcttcaaggacccacccaggcttccacctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattggcttacaccaaactagctactacttcttcaaggacccacccaggcttccacctcg 380
Query: 181 aagggcaggagcaggctccacgcttgg 207
|||||||||||||||||||||||||||
Sbjct: 381 aagggcaggagcaggctccacgcttgg 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no071_l17.g1 MSMg01no071_l17.g1 CHROMAT_FILE:
MSMg01no071_l17.g1 PHD_FILE: MSMg01no071_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:14 2005
(267 letters)
>mm_chr10_79378482_79379148
Length = 667
Score = 487 bits (252), Expect = e-142
Identities = 264/268 (98%), Gaps = 2/268 (0%)
Strand = Plus / Minus
Query: 1 aggtcttgtgacctgtggccctgacagttacctttgtgggtcaagcgctgccttggcccc 60
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 384 aggtcttgtgacctgtggccctgacagttacctttgcgggccaagcgctgccttggcccc 325
Query: 61 tggccagcatgctgagtttctttgtgccttggtttcccccatctggatgtggacagttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggccagcatgctgagtttctttgtgccttggtttcccccatctggatgtggacagttga 265
Query: 121 ctctttgtcagactcggggtggggtggcaaagcccttccttccatggtgtccagtattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctctttgtcagactcggggtggggtggcaaagcccttccttccatggtgtccagtattct 205
Query: 181 agggttctatttggttctacctttgttggttgtactttattta-ttttttttaatatttt 239
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 204 agggttctatttggttctacctttgttggttgtacttta-ttatttttttttaatatttt 146
Query: 240 attttatgtttatgggcattttgtctgt 267
||||||||||||||||||||||||||||
Sbjct: 145 attttatgtttatgggcattttgtctgt 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
