Query= MSMg01no072_e02.b1 MSMg01no072_e02.b1 CHROMAT_FILE:
MSMg01no072_e02.b1 PHD_FILE: MSMg01no072_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:56 2005
(458 letters)
>mm_chr10_20357167_20358025
Length = 859
Score = 781 bits (404), Expect = 0.0
Identities = 444/460 (96%), Gaps = 7/460 (1%)
Strand = Plus / Plus
Query: 2 gaattcaaatcaccagtctgatgtcgttattctcctaagagattgctgtgcgtggggttt 61
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 202 gaattcaaatcaccagtttgatgtcgttattctcttaagagattgctgtgcgtggggttt 261
Query: 62 actctgagtcctacttgagggtaaagacttctcaaagtattataggtttaaaacataact 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 actctgagtcctacttgagggtaaagacttctcaaagtattataggtttaaaacataac- 320
Query: 122 cttctctggaaaaccagcaaat--tctctctctctgt--atgtctctctactcccaggtc 177
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 321 --tctctggaaaaccagcaaattctctctctctctgtgaatgtctctctactcccaggtc 378
Query: 178 cctgcagactatatatatagagagagtgaattcaaccatgcaatgaagaacacctctgag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cctgcagactatatatatagagagagtgaattcaaccatgcaatgaagaacacctctgag 438
Query: 238 gtaccgctgtatgccaaacattttcagataccactattcaaagctgccactcagatccca 297
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 439 gtaccgctgtatgccaaacattttcagatgccactattcaaagctgccactcagatccca 498
Query: 298 tatttatataacctaggcttggaatttgaaggcttatgaattaataaatgggattaatgt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tatttatataacctaggcttggaatttgaaggcttatgaattaataaatgggattaatgt 558
Query: 358 gcattgttttagtaccctaatatacatttctaaatcttatacctattttttttaatggca 417
|||||||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||
Sbjct: 559 gcattgttttagcaccctgatatacatttctaaatcttatagctattttttaaaatggca 618
Query: 418 aataataccaaaatgaaacaaagagagaaaatttgtttta 457
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 619 aataatagcaaaatgaaacaaagagagaaaatttgtttta 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 859
Length adjustment: 10
Effective length of query: 448
Effective length of database: 849
Effective search space: 380352
Effective search space used: 380352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_e02.g1 MSMg01no072_e02.g1 CHROMAT_FILE:
MSMg01no072_e02.g1 PHD_FILE: MSMg01no072_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:56 2005
(423 letters)
>mm_chr10_20483897_20484719
Length = 823
Score = 795 bits (411), Expect = 0.0
Identities = 417/419 (99%)
Strand = Plus / Minus
Query: 5 tacagtcttagaaaaaaaatctctgatattgctgggctgccacttaccataactcattta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tacagtcttagaaaaaaaatctctgatattgctgggctgccacttaccataactcattta 564
Query: 65 atatgttatggtaggtagcctgagcatagagatgttgcaaagtttataggaagctccata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atatgttatggtaggtagcctgagcatagagatgttgcaaagtttataggaagctccata 504
Query: 125 ggaaagttgaaactcataaagcaagacagacatattgcagccacctggatcaagcctgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggaaagttgaaactcataaagcaagacagacatattgcagccacctggatcaagcctgtc 444
Query: 185 acataacggtttccctataaaggattgttgatagatctgcctctcagcttcaaaggtatc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 443 acataacggtttccctataaaggattgttgatagatctgcctctcagcttcaaaggcatc 384
Query: 245 atagtgcagcatgaatttctcatgaggtgctttctaaatatctccctttatcttctaaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atagtgcagcatgaatttctcatgaggtgctttctaaatatctccctttatcttctaaat 324
Query: 305 gtaacttttggctacgttctggaactggccctctcctttattgctttataatgagcagcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtaacttttggctacgttctggaactggccctctcctttattgctttataatgagcagcc 264
Query: 365 gcacgctgagttattacctcagcttcccttcttttccacgtttgctcttgaaactttac 423
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcacgctgagttattagctcagcttcccttcttttccacgtttgctcttgaaactttac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
