Query= MSMg01no073_f15.b1 MSMg01no073_f15.b1 CHROMAT_FILE:
MSMg01no073_f15.b1 PHD_FILE: MSMg01no073_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:23 2005
(445 letters)
>mm_chr10_122609851_122610695
Length = 845
Score = 804 bits (416), Expect = 0.0
Identities = 439/456 (96%), Gaps = 15/456 (3%)
Strand = Plus / Minus
Query: 5 gaattctcaccccatccgagcatagcttaaatctacaggtttttaccctcagaaatgatg 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaattctcaccccagacgagcatagcttaaatctacaggtttttaccctcagaaatgatg 688
Query: 65 tggggtgctatcatgtagtgctaggtg---------------gttttctgggtactgtaa 109
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 687 tggggtgctatcatgtagtgctaggtggctcatactagttaagttttctgggtactgtaa 628
Query: 110 tattaacatagcaagaactatggctttggctacacagtgagcagaaggtataaaacatga 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tattaacatagcaagaactatggctttggctacacagtgagcagaaggtataaaacatga 568
Query: 170 gtatcaataaaaacctaagcggccttaagcagactgaggagaatttggggttgaggagaa 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtatcaataaaaacctaagcggccttaagcagactgaggagaatttggggttgaggagaa 508
Query: 230 tacttaaaggaaaagtagggaagccttggaaactagagggatataacctttgcaaatgtc 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tacttaaaggaaaagtagggaagccttggaaactagagggatataacctttgcaaatgtc 448
Query: 290 tctactgtaaactgaaagattaaaaacactgtgtcatgaatttagtgatttgccaaagta 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tctactgtaaactgaaagattaaaaacactgtgtcatgaatttagtgatttgccaaagta 388
Query: 350 gtgttcaacatctacttgtattgcctagagtccttgtataaggataataagctaaagatg 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgttcaacatctacttgtattgcctagagtccttgtataaggataataagctaaagatg 328
Query: 410 gaatcttaactataacagagcaataatttactagct 445
||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaatcttaactataacagagcaataatttactagct 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_f15.g1 MSMg01no073_f15.g1 CHROMAT_FILE:
MSMg01no073_f15.g1 PHD_FILE: MSMg01no073_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:23 2005
(274 letters)
>mm_chr10_122438768_122439441
Length = 674
Score = 497 bits (257), Expect = e-145
Identities = 269/273 (98%)
Strand = Plus / Plus
Query: 1 cagtctatagctcaactgagatcaaccctgcagcccctgccacaaatacaagctggatat 60
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtccatagctcaactgagatcagccctgcagcccctgccacaaatacaagctggatat 260
Query: 61 acaagaaggggtcagtgtaggggcaggggctttgttaaacagattagaaaaaacagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaagaaggggtcagtgtaggggcaggggctttgttaaacagattagaaaaaacagattt 320
Query: 121 aagacaggaacaggtgggcgggagagatggctcagtggttaagagcactgattgctcttc 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagacaggaacaggtgggtgggagagatggctcagtggttaagagcactgattgctcttc 380
Query: 181 tgaggtcctgagttcaattcccagaaactacaaccatctatggttgtgatgggatctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggtcctgagttcaattcccagaaactacaaccatctatggttgtgatgggatctgat 440
Query: 241 gccctcttctgatgtgtctgaagacagctacag 273
||||||||||| |||||||||||||||||||||
Sbjct: 441 gccctcttctggtgtgtctgaagacagctacag 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
