Query= MSMg01no074_a22.b1 MSMg01no074_a22.b1 CHROMAT_FILE:
MSMg01no074_a22.b1 PHD_FILE: MSMg01no074_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:19 2005
(314 letters)
>mm_chr10_93377015_93377730
Length = 716
Score = 559 bits (289), Expect = e-164
Identities = 305/311 (98%), Gaps = 4/311 (1%)
Strand = Plus / Plus
Query: 6 gaattctctgct--ttctttgcttctgcttctctc-tattttcctctagagtgtggtggt 62
|||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 206 gaattctctgctcatt-tttgcttctgcttctctcatattttcctctagagtgtggtggt 264
Query: 63 gtcaagtactacaccggttatcactgtcttgcttttaaccctaacccaactccgtgacca 122
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtcaagtactagactggttatcactgtcttgcttttaaccctaacccaactccgtgacca 324
Query: 123 ggaattcaaatgtcaccgtgatgtagcagtttagactttagaccctgacattcacctgac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaattcaaatgtcaccgtgatgtagcagtttagactttagaccctgacattcacctgac 384
Query: 183 tcttaagctcctggtcatgggactggaggcacttaatttctcaaggccttaatctcctca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttaagctcctggtcatgggactggaggcacttaatttctcaaggccttaatctcctca 444
Query: 243 tgtaaaattaggactcttaaagggtctatgtcactgagcttcgaaaagcagaaagtgaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtaaaattaggactcttaaagggtctatgtcactgagcttcgaaaagcagaaagtgaga 504
Query: 303 tcactcgacta 313
|||||||||||
Sbjct: 505 tcactcgacta 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 716
Length adjustment: 9
Effective length of query: 305
Effective length of database: 707
Effective search space: 215635
Effective search space used: 215635
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_a22.g1 MSMg01no074_a22.g1 CHROMAT_FILE:
MSMg01no074_a22.g1 PHD_FILE: MSMg01no074_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:19 2005
(290 letters)
>mm_chr10_93524131_93524821
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 cctaaac-cagggttgactgatggcgtccacctggggggctccagcaccgtagccaacag 59
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 491 cctaaacacagggttgactgatggcgtccacctggggggctccagcagcgtagccaacag 432
Query: 60 aaatccttattgggacaagatttcagcagcgggcacgcggaggacaaatgcactcggaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaatccttattgggacaagatttcagcagcgggcacgcggaggacaaatgcactcggaga 372
Query: 120 gtgctgacgacaggttcacaaaacacttcctttttgaacaggctctgtaagaatgagtgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtgctgacgacaggttcacaaaacacttcctttttgaacaggctctgtaagaatgagtgt 312
Query: 180 ttagagaactgctaccttgttcgcctgcttcctgataggtcttactagatggcacagatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttagagaactgctaccttgttcgcctgcttcctgataggtcttactagatggcacagatt 252
Query: 240 gcctccacgtgtgacaacacccacctggcttagcactctacaggttatcaa 290
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcctccacgtgtgacaacacccacctggcttagcactctacaggttatcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
