Query= MSMg01no075_b04.b1 MSMg01no075_b04.b1 CHROMAT_FILE:
MSMg01no075_b04.b1 PHD_FILE: MSMg01no075_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:38 2005
(455 letters)
>mm_chr10_104501233_104502089
Length = 857
Score = 746 bits (386), Expect = 0.0
Identities = 437/454 (96%), Gaps = 6/454 (1%)
Strand = Plus / Plus
Query: 6 gaattccaggtaccatcaccgtgggtcataaccatccttaattttagttccatggcacca 65
||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 206 gaattccaggtaccaacatggtgggtcataaccatccttaattttagtttcatggcacca 265
Query: 66 agcaccaagcatacatgatgcacatgcatgtggaaagagacaaattattcatacatataa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agcaccaagcatacatgatgcacatgcatgtggaaagagacaaattattcatacatataa 325
Query: 126 agtaaaaccaaattttaaaatgttgggaaagaatttttatgaggaactcttttgtgtggt 185
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agtaaaaccaatttttaaaatgttgggaaagaatttttatgaggaactcttttgtgtggt 385
Query: 186 taccatagacataaaattatagaatgtgaaatatgataatgattatcaaatgtagtatgc 245
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 386 taccatagatataaaattatagaacgtgaaatatgataatgattatcaaatgtagtatgc 445
Query: 246 tttcatgaacatattgagtacaaaatccaggattt-aggtctaattcaaac-cgtaac-a 302
| ||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |
Sbjct: 446 tctcatgaacatattgagtacaaaatccaggattttaggtctaattcaaactc-taaata 504
Query: 303 tatttggctctggatggtcaaggtatatagtatgtaatgtttcttgactggaatttcccc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatttggctctggatggtcaaggtatatagtatgtaatgtttcttgactggaatttcccc 564
Query: 363 tgaaaagaaattcaaat-ataagttcattctatacttacttcctaagataacaggcccgg 421
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaaaagaaatt-aaattataagttcattctatacttacttcctaagataacaggcccga 623
Query: 422 tccttataaggactttaaaacagggatcattcaa 455
| ||||||||||||||||||||||||||||||||
Sbjct: 624 ttcttataaggactttaaaacagggatcattcaa 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 857
Length adjustment: 10
Effective length of query: 445
Effective length of database: 847
Effective search space: 376915
Effective search space used: 376915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_b04.g1 MSMg01no075_b04.g1 CHROMAT_FILE:
MSMg01no075_b04.g1 PHD_FILE: MSMg01no075_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:38 2005
(245 letters)
>mm_chr10_104673777_104674421
Length = 645
Score = 435 bits (225), Expect = e-126
Identities = 240/245 (97%)
Strand = Plus / Minus
Query: 1 catctaactgtgggataacagaaacatcaaagacagttgcagggtataaaaatcctagct 60
|||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||
Sbjct: 445 catctaactgtgggataacagaaacatcaaagacagttacagggtgtaaaaattctagct 386
Query: 61 gatgagcagtgaacactgatataaaaggcaaagagaagcaaggacatgattgtctactga 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 gatgagcagtgaacactgatataaaaggcaaagagaaacaaggacatgattgtctactga 326
Query: 121 tgcagagagaaagatgccccttggtggcctttaagatcccatttccatactagtgatggg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 tgcagagagaaagatgccccttggtggcctttaagatcccatttccatactagtgacggg 266
Query: 181 gacagttttcagctactaagaaaagaagagcagtcatggggctcattaaacattctggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacagttttcagctactaagaaaagaagagcagtcatggggctcattaaacattctggac 206
Query: 241 gaagg 245
|||||
Sbjct: 205 gaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
