Query= MSMg01no075_m15.b1 MSMg01no075_m15.b1 CHROMAT_FILE:
MSMg01no075_m15.b1 PHD_FILE: MSMg01no075_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:32 2005
(612 letters)
>mm_chr10_40807075_40808086
Length = 1012
Score = 1125 bits (582), Expect = 0.0
Identities = 603/610 (98%)
Strand = Plus / Minus
Query: 3 gaattccttatgtttctcgataattgctccctcttaagtataggcaaatgcttgggggaa 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gaattccttatgtttctggataattgctccctcttaagtataggcaaatgcttgggggaa 753
Query: 63 attaatttcacttgaaatagtgacttgtcatttggaatagaaaaagcaaatgtaccagac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 attaatttcacttgaaatagtgacttgtcatttggaatagaaaaagcaaatgtaccagac 693
Query: 123 gaatcaaagccaacctaaaattaaattgtgatactcacctactgtttagatacccaaaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaatcaaagccaacctaaaattaaattgtgatactcacctactgtttagatacccaaaca 633
Query: 183 ctgcataaatgttgcatcattatcagtgaatggagataaggggattgtcaggggcgggat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ctgcataaatgttgcatcattatcagtgaatggagataaggggattgtcaggggcgggat 573
Query: 243 ttccccactatatttcattgtagtatgacttctatttcaaatgtaactttctttagcact 302
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 572 ttccccactatatttcattgtagtatgacttctaagtcaaatgtaactttctttagcact 513
Query: 303 ctatatcacaagatatttcctctgtcaacatcataggacacaaccctgcacatatgcaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctatatcacaagatatttcctctgtcaacatcataggacacaaccctgcacatatgcaaa 453
Query: 363 caaaaattcatacacaagacactgaaaactcatgcttagattttctgtatgcaattacat 422
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caaaaattcatatacaagacactgaaaactcatgcttagattttctgtatgcaattacat 393
Query: 423 atatagcactatgtagaatagagcacgatatacataaccgagtgcacacagccctgtaca 482
||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 392 atatagcactatgtagaatagggcatgatatacataactgagtgcacacagccctgtaca 333
Query: 483 gcacacaggctcagcaaatgcatggctactaaacatagaacaccctagatcttggaacat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcacacaggctcagcaaatgcatggctactaaacatagaacaccctagatcttggaacat 273
Query: 543 tacacagcatctggctatcatatgcctacacaaaccaagcacaacacaaaactgcaaaat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tacacagcatctggctatcatatgcctacacaaaccaagcacaacacaaaactgcaaaat 213
Query: 603 acaacataca 612
||||||||||
Sbjct: 212 acaacataca 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_m15.g1 MSMg01no075_m15.g1 CHROMAT_FILE:
MSMg01no075_m15.g1 PHD_FILE: MSMg01no075_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:32 2005
(494 letters)
>mm_chr10_40657951_40658849
Length = 899
Score = 899 bits (465), Expect = 0.0
Identities = 489/499 (97%), Gaps = 5/499 (1%)
Strand = Plus / Plus
Query: 1 tcttaaaggaatggttagctttggttatcattttgttgtttttgaatacttgccttattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaaaggaatggttagctttggttatcattttgttgtttttgaatacttgccttattt 260
Query: 61 gaacgtttagcagaaccccttcccacttatatattgtgtggtacagttttgcttgcctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacgtttagcagaaccccttcccacttatatattgtgtggtacagttttgcttgcctat 320
Query: 121 agaagtttaaatttttccatgtgaaatactcagaataagcatatgtgtgacttacataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagtttaaatttttccatgtgaaatactcagaataagcatatgtgtgacttacataat 380
Query: 181 gtgagaattacaatctgatgtaataaacggttcattttaaaggctcttggctgtcgctct 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 gtgagaattacaatctgatgtaataaacggttcattttaaaggctcttgggtgtcgctct 440
Query: 241 tcgagtgaatgcgttggtaaggaagcgtgtgagagatttcagggagcaacttcagctcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgagtgaatgcgttggtaaggaagcgtgtgagagatttcagggagcaacttcagctcta 500
Query: 301 tcagttccttagttttaaaactc----ggtctcttatgtgaggggactttatgccatgct 356
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 tcagttgcttagttttaaaactcaaacggtctcttatgtgaggggactttatgccatgct 560
Query: 357 tttctgaagctacacagtttctgtctccgttccttatggtcttcacattccagctcgcca 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tttctgaagctacacagtttctgtctccgttccttatggtcttcacattccagctcaaca 620
Query: 417 gctccct-cacctgccatgttatcggtgtgacaccactcctgtagccttgtgtgacaaca 475
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 gctcccttcacctgccatgttatcggtgtggcaccactcctgtagccttgtgtgacaaca 680
Query: 476 agtggttagtatcgcatcg 494
|||||||||||||||||||
Sbjct: 681 agtggttagtatcgcatcg 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 899
Length adjustment: 10
Effective length of query: 484
Effective length of database: 889
Effective search space: 430276
Effective search space used: 430276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
