Query= MSMg01no076_m20.b1 MSMg01no076_m20.b1 CHROMAT_FILE:
MSMg01no076_m20.b1 PHD_FILE: MSMg01no076_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:54 2005
(365 letters)
>mm_chr10_57029457_57030221
Length = 765
Score = 661 bits (342), Expect = 0.0
Identities = 357/362 (98%), Gaps = 2/362 (0%)
Strand = Plus / Minus
Query: 5 gaattccacatcttgatctcg-agatagcagaagaagactgccacgctgaatatgacttg 63
||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||
Sbjct: 754 gaattccacatcttgatct-gtagatagcagaagaagactgccacactgaatatgacttg 696
Query: 64 agtatatatgagacctcaaagcctacctccacagtgtgtccaacaaggccacacctccta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 agtatatatgagacctcaaagcctacctccacagtgtgtccaacaaggccacacctccta 636
Query: 124 atagtgacattcctggtaggccaagctttaaaacacatgagtctatgggggctatttcta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 atagtgacattcctggtaggccaagctttaaaacacatgagtctatgggggctatttcta 576
Query: 184 ttcaaaccactcaaccgtactaataatctcacctgggattggaaaaaaattctccatcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttcaaaccactcaaccgtactaataatctcacctgggattggaaaaaaattctccatcct 516
Query: 244 aaagtatgcactttatatgtacacatgtgaaatatacaatttaaaaattgttcataacaa 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaagtatgcactttatatgtacacatgtgaaatatacaatttaaaaattgttcataacag 456
Query: 304 caaaatgtctggaaatgcagacacattgtaacagttaagatgcatagctacatcatttgg 363
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caaaatgtctggaaatgcaaacacattgtaacagttaagatgcatagctacatcatttgg 396
Query: 364 ac 365
||
Sbjct: 395 ac 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_m20.g1 MSMg01no076_m20.g1 CHROMAT_FILE:
MSMg01no076_m20.g1 PHD_FILE: MSMg01no076_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:55 2005
(621 letters)
>mm_chr10_56840277_56841293
Length = 1017
Score = 1069 bits (553), Expect = 0.0
Identities = 598/613 (97%), Gaps = 4/613 (0%)
Strand = Plus / Plus
Query: 9 gggtgcttgaatgcctaccttggcatctctgtacatgaattttgaatataatattttcta 68
|||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 209 gggtgcttgaattcctaccttggcatatctgtacatgaattttgaatataattttttcta 268
Query: 69 tttagtgtttgatcttcctgtaaataaggagggaattactgacactattgctctgcaaac 128
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tt-agtgtttgatcttcctgtaaataaggagggaattactgacactattgctctgcaaac 327
Query: 129 acaggaagaaaataaatactaatattttactgtgtgatttactctagtctgttctatcag 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acaggaagaaaataaatactaatattttactgtgtgatttactctagtctgttctatcag 387
Query: 189 tttaaaaatgggacagtatttatagcagtttaagaagattttcatataaagtgaatcaaa 248
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 388 tttaaaaatgggacagtatttatagcagtttaagaagattttcatataaaatgaatcaaa 447
Query: 249 atagtaatgggatgtggggaaggacattaatattttatacctgctgcatcttttacattc 308
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 448 atagtaatgggatgtggggaaggacattgatattttatacctgctgcatcttttacattc 507
Query: 309 aggcaaaagctacagcaagggtaatatctcagtttccctccttagaaacataattacaac 368
|||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||
Sbjct: 508 aggcaaaagctacagcaagggtaa-atctcagct-ccctccttagaaacgtaattacaac 565
Query: 369 tgtgtttaatcttgcatttctatgtaagaaaataggctcagagattatctcctttattta 428
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 566 tgtgtttaatcttgcatttctatgtaagaaaataggctcagagataacctcctttattta 625
Query: 429 tccaaccatcccagtactagttattgaaattaaaacaaaaacactagtccaaggatcagt 488
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 626 tccaaccatcccagtactagttattgaaattaagacaaaaacactagtccaaggatcagt 685
Query: 489 gcctatgttcaaaatttcatttcaataaaaccaaaacttttctactctagatcagtgagc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gcctatgttcaaaatttcatttcaataaaaccaaaacttttctactctagatcagtgagc 745
Query: 549 aatcattgtctataaataacaacctaaatacaaatcttcaatgttatgaatttacagtta 608
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 746 aatcattgtctataaataactac-taaatacaaatcttcaatgttatgaatttacagtta 804
Query: 609 ttaaataatggct 621
|||||||||||||
Sbjct: 805 ttaaataatggct 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1017
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1007
Effective search space: 615277
Effective search space used: 615277
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
