Query= MSMg01no078_f16.b1 MSMg01no078_f16.b1 CHROMAT_FILE:
MSMg01no078_f16.b1 PHD_FILE: MSMg01no078_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:39 2005
(620 letters)
>mm_chr10_40980806_40981825
Length = 1020
Score = 1083 bits (560), Expect = 0.0
Identities = 604/620 (97%), Gaps = 7/620 (1%)
Strand = Plus / Plus
Query: 5 gaattccatga--t-tccagatattcagggctctatttacaagaagttttcaattatact 61
||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 gaattccatgaagtat--agatattcagggctccatttacaagaagttttcaattatact 261
Query: 62 ctgtaaggcaggaacaagatccactcatctagaggtaggtatttgttccactaatagacc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctgtaaggcaggaacaagatccactcatctagaggtaggtatttgttccactaatagacc 321
Query: 122 atcact-tcctgctttgctgttaatttgcttctatactactaatctatacttattggaga 180
|||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 322 atcactctc-tgctttgctgttaatttgcttctatactactaatctatacttactggaga 380
Query: 181 agcactcatacttatcacagtttgtacaatcccagggactgaaacctgggcctcacatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 agcactcatacttatcacagtttgtacaatcccagggactgaaacctgggcctcacacgt 440
Query: 241 gctcaccagtgctctaacactgagacacatctttccctggcctccttgtactcagggaca 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gctcaccagtgctctaacactgagacacatccacccctggcctccttgtactcagggaca 500
Query: 301 gggtctcactaagctgctcaagctagactaaaattcactctgcagcataggtaggcctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtctcactaagctgctcaagctagactaaaattcactctgcagcataggtaggcctta 560
Query: 361 aacttgtgatccccctgcctctgcttcttgaataactggaatgataggcctgtactacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacttgtgatccccctgcctctgcttcttgaataactggaatgataggcctgtactacca 620
Query: 421 ggcctagcagcagatgaacaaatgttttcattaaagttttccactttaattttcaaactg 480
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 621 ggcctagcagcagatgaacaaatgttttcattaaagttttctaccttaattttcaaactg 680
Query: 481 tgtacattactgctacttttcaatgttgaaagttatagattatccatttccaacttatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtacattactgctacttttcaatgttgaaagttatagattatccatttccaacttatat 740
Query: 541 taccccaagcagccagggaatgagacatgaatatacaacttctgcattcatgaagacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taccccaagcagccagggaatgagacatgaatatacaacttctgcattcatgaagacagt 800
Query: 601 tgtgaagcagcccttggctg 620
|||||||||| |||||||||
Sbjct: 801 tgtgaagcagtccttggctg 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_f16.g1 MSMg01no078_f16.g1 CHROMAT_FILE:
MSMg01no078_f16.g1 PHD_FILE: MSMg01no078_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:39 2005
(530 letters)
>mm_chr10_41084028_41084962
Length = 935
Score = 928 bits (480), Expect = 0.0
Identities = 520/536 (97%), Gaps = 7/536 (1%)
Strand = Plus / Minus
Query: 1 cactgggtctgggcaaagcagtggtgtcaagtgtttcagaaccgctggagctttatgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cactgggtctgggcaaagcagtggtgtcaagtgtttcagaaccgctggagctttatgaga 676
Query: 61 aagatcccgaagaaattctgtgtaatcttggatttggacgagatgaaccggatattgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 675 aagatcccgaagaaattctgtgtaatcttggatttggacgagatgaaccagatactgctt 616
Query: 121 ctaaaattccttccagattttaaaattcatcatcctttgccagaggcatagacattaaag 180
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 615 ctaaaattccttccagatttttaaattcatcaccctttgccagaggcatagacattaaag 556
Query: 181 tatttctgagtgcacagatgcaacagttggaagtagagaactcaaactatgctctaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tatttctgagtgcacagatgcaacagttggaagtagagaactcaaactatgctctaacaa 496
Query: 241 gccaattttgccaaattgaagtcctcactactgtggccaatgcattttcttctctctatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gccaattttgccaaattgaagtcctcactactgtggccaatgcattttcttctctctatt 436
Query: 301 cccaagtctctggaactccactgcagagggttggaagggaagtaagtcctcagtgacctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 435 cccaagtctctggaactccactgcagagggttggaagggaagtaagtcctcggtgacctc 376
Query: 361 caccaaggaggtggcagac-----ccccccccccaacttgaagcaacactgcaaaccgtc 415
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 375 caccaaggaggtggcagacaccccccccccccccaactcgaagcaacactgcaaaccgtc 316
Query: 416 tgatgaaaacactattaaaactaaacttatgggttgataaaacagagaaaggagaaggga 475
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgatgaaaacactatcaaaactaaacttatgggttgataaaacagagaaaggagaaggga 256
Query: 476 gccccgccccctgctgctgagaaaggaaggaatctaagt-ggctcactgtctgaag 530
|||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 255 gccctgccccctgctgctgagaaaggaaggagtctaa-tcggctcactgtctgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 935
Length adjustment: 10
Effective length of query: 520
Effective length of database: 925
Effective search space: 481000
Effective search space used: 481000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
