Query= MSMg01no079_j01.b1 MSMg01no079_j01.b1 CHROMAT_FILE:
MSMg01no079_j01.b1 PHD_FILE: MSMg01no079_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:13 2005
(526 letters)
>mm_chr10_120464085_120465010
Length = 926
Score = 675 bits (349), Expect = 0.0
Identities = 369/377 (97%), Gaps = 3/377 (0%)
Strand = Plus / Minus
Query: 5 gaattcccaggcctaaccttcaccgctgctgacggttgggacattctatgatgaaaactc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaattcccaggcctaaacttcaccgctgctgacggttgggacattctatgatgaaaactc 315
Query: 65 cccagatctcctcagaactaagaggaatggagttcttaacaagctttgtgaagaaacctc 124
|||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||
Sbjct: 314 cccagatctcctcagaactaggaggaatggagttcttaacaagccttgtgaaaaaacctc 255
Query: 125 tctgaatacctaaggcacaggcagagacttcaggagaatagtttcttttctttttaattc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tctgaatacctaaggcacaggcagagacttcaggagaatagtttcttttctttttaattc 195
Query: 185 tttgttaaaattaatttattttatttatatgaatacactgtagctgtcttcagacacacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttgttaaaattaatttattttatttatatgaatacactgtagctgtcttcagacacacc 135
Query: 245 agaaaaaggcatcagatctcattacagatggttgtgagccaccatgtggttgttgggaat 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 agaaaagggcatcagatctcattacagatggttgtgagccaccatgtggttgttgggaat 75
Query: 305 tgaactcaggacctcaggcagagcaggcagtgctcttaaccactgagccatctctccagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tgaactcaggacctcaggcagagcaggcagtgctcttaaccactgagccatctctccagc 15
Query: 365 ccccaataataatactt 381
||| |||||||||||
Sbjct: 14 ccc---taataatactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_j01.g1 MSMg01no079_j01.g1 CHROMAT_FILE:
MSMg01no079_j01.g1 PHD_FILE: MSMg01no079_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:14 2005
(565 letters)
>mm_chr10_120299430_120300394
Length = 965
Score = 1013 bits (524), Expect = 0.0
Identities = 527/528 (99%)
Strand = Plus / Plus
Query: 38 taataataataataataataaatgttatataactcttagtttacagttgaagacatggaa 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 taataataataataataataaatgttatataactcttagtttacagttgaagacatggaa 297
Query: 98 taaaaggtagaaaaggatgcttccggggccccacagcaaactggtaataaaaacaaacca 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 taaaaggtagaaaaggatgcttccggggccccacagcaaactggtaataaaaacaaacca 357
Query: 158 gtaaggaatatataatttgtttcttcatcaatgccaaaactatagtaaaaggctctgaaa 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtaaggaatatataatttgtttcttcatcaatgccaaaactatagtaaaaggctctgaaa 417
Query: 218 cttgaggttaagttatataaaatcacatgggtgatattaaaatattaatcaagtggaatg 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cttgaggttaagttatataaaatcacatgggtgatattaaaatattaatcaagtggaatg 477
Query: 278 agtcatcctgagataatatgtattctggcagtaaaatcttataaaattacaactgtaaag 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agtcatcctgagataatatgtattctggcagtaaaatcttataaaattacaactgtaaag 537
Query: 338 atatttagaatggtagattttcctggcttgcctaaaattcaaataatctattgatttaaa 397
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atatttacaatggtagattttcctggcttgcctaaaattcaaataatctattgatttaaa 597
Query: 398 ataatatcccgttctctgtaatcgcgtggctgaatataagcatcataaagtagtgttgaa 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ataatatcccgttctctgtaatcgcgtggctgaatataagcatcataaagtagtgttgaa 657
Query: 458 gggagaagtatttatcataaaagttaatatgtgtaactgtgcaagtatataatttattaa 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gggagaagtatttatcataaaagttaatatgtgtaactgtgcaagtatataatttattaa 717
Query: 518 tccactgtgtacctagtaaatacttttgaagcatttttagataagtga 565
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tccactgtgtacctagtaaatacttttgaagcatttttagataagtga 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
