Query= MSMg01no079_j10.b1 MSMg01no079_j10.b1 CHROMAT_FILE:
MSMg01no079_j10.b1 PHD_FILE: MSMg01no079_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:15 2005
(480 letters)
>mm_chr10_15807066_15807946
Length = 881
Score = 891 bits (461), Expect = 0.0
Identities = 473/477 (99%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 5 gaattcttatgtgtctc-catttattcacccacactaatttctgcaacataaacctacat 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttatgtgtctaacatttattcacccacactaatttctgcaacataaacctacat 264
Query: 64 ggctatagcattactagttttccattatcctccattaagtccatcctataaaaatatagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggctatagcattactagttttccattatcctccattaagtccatcctataaaaatatagc 324
Query: 124 aacatgttttcttgtgattttgaactatagtgtataatttaagcacactttttgatggac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacatgttttcttgtgattttgaactatagtgtataatttaagcacactttttgatggac 384
Query: 184 cgtcttatatatgccattagctgcagtagcatttcttcttattggagagcagtttatatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgtcttatatatgccattagctgcagtagcatttcttcttattggagagcagtttatatc 444
Query: 244 tttcctgttcaggaaattacaagtgattgtgctttaaattattattttcagcagttagcg 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 445 tttcctgttcaggaaattacaagtgattgtgctttaaattattattttcagcagttagtg 504
Query: 304 ttagatttcctacagaaatggtttctagaagacctcacaccgttatcctagctcagaata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttagatttcctacagaaatggtttctagaagacctcacaccgttatcctagctcagaata 564
Query: 364 tttctcttaaccaatgttgacaggtataaatacataaaatagggaatccataataaaaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttctcttaaccaatgttgacaggtataaatacataaaatagggaatccataataaaaca 624
Query: 424 gtgatacttctcataggaatcacaaacatataatataatctactttcaacagaattg 480
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgatacttctcaaaggaatcacaaacatataatataatctactttcaacagaattg 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 881
Length adjustment: 10
Effective length of query: 470
Effective length of database: 871
Effective search space: 409370
Effective search space used: 409370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_j10.g1 MSMg01no079_j10.g1 CHROMAT_FILE:
MSMg01no079_j10.g1 PHD_FILE: MSMg01no079_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:15 2005
(508 letters)
>mm_chr10_15941591_15942498
Length = 908
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%)
Strand = Plus / Minus
Query: 1 cttaatgattacatgattgaagacaatggctatgtctctcccagagtcattcagaagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttaatgattacatgattgaagacaatggctatgtctctcccagagtcattcagaagtca 252
Query: 61 gtgactaagacaatgggatgataggaccataccagctcctccttgacacatatggctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gtgactaagacaatgggatgataggaccataccagctcctccttgacacatatggctgag 192
Query: 121 aagcacttaaagaaatcttcaaagtccttagtaatcagggaaatgaaaatcaaaatgacc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aagcacttaaagaaatgttcaaagtccttagtaatcagggaaatgaaaatcaaaatgacc 132
Query: 181 ctgagattctaccttacaccaataagagtggctaaggtaaaactgaggtgacagcacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctgagattctaccttacaccaataagagtggctaaggtaaaactgaggtgacagcacatg 72
Query: 241 ttggttagtatgtggacaaagtggaacactcctcaattcctggttggattgtaaactggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ttggttagtatgtggacaaagtggaacactcctcaattcctggttggattgtaaactggt 12
Query: 301 acagccaccgt 311
|||||||||||
Sbjct: 11 acagccaccgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
