Query= MSMg01no081_k01.b1 MSMg01no081_k01.b1 CHROMAT_FILE:
MSMg01no081_k01.b1 PHD_FILE: MSMg01no081_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:53 2005
(525 letters)
>mm_chr10_105799818_105800742
Length = 925
Score = 930 bits (481), Expect = 0.0
Identities = 508/521 (97%), Gaps = 7/521 (1%)
Strand = Plus / Plus
Query: 5 gaattcaataaaatgcaggttatggtgtattgaaacagaaaaaaaatatatgcaggcata 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaataaaatgaaggttatggtgtattgaaacagaaaaaaaatatatgcaggcata 264
Query: 65 atgtttggttgggaatacaagttattttccatgttggaatgaaaatggaatggtgtatga 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgtttggttgggaatacaagttgttttccatgttggaatgaaaatggaatggtgtatga 324
Query: 125 agactaagtcaatctgtttgatgattccatttatagccattttcatgggcttgcctttac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agactaagtcaatctgtttgatgattccatttatagccattttcatgggcttgcctttac 384
Query: 185 aatgttccccactgaacgaaatagaaataatatctgttggctatttagtttgctttaaaa 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 aatgttccccactgaacgaaatagaaataatgtctgttggctatttagtttgctttaaaa 444
Query: 245 tattttagagtagtggaacgaactgcttcataggataagagaaatcttatgaaggcacag 304
||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 445 tattttagagtagtggaac-------ttcataggataagagaaaccttatgaaggcacag 497
Query: 305 acctggatgagggcaggttgttgaaagggtatttgggtacaggagaaatttcacaacaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 acctggatgagggcaggttgttgaaagggtatttgggtacaggagaaatttcacaacaga 557
Query: 365 atgtggatgactgggaggatagccgaagacacttctcagaaacagcttatcttatccatt 424
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 558 atgtggatgactgggaggatagccgaagacacttctcagaaacagcttatgttatccatt 617
Query: 425 ccattaattgcaactcttagaagagagtgtattgaataatactggtagtctgtagcaatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccattaattgcaactcttagaagagagtgtattgaataatactggtagtctgtagcaatc 677
Query: 485 tgaatggattattaaagattcagttcacagatcacatgaag 525
||||||||||||||||||||||||||| |||||||||||||
Sbjct: 678 tgaatggattattaaagattcagttcatagatcacatgaag 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_k01.g1 MSMg01no081_k01.g1 CHROMAT_FILE:
MSMg01no081_k01.g1 PHD_FILE: MSMg01no081_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:54 2005
(473 letters)
>mm_chr10_105973150_105974022
Length = 873
Score = 723 bits (374), Expect = 0.0
Identities = 383/386 (99%)
Strand = Plus / Minus
Query: 1 attgactcactctgaaatgaactgacaagagacaagagtcaattttcttgagagttaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 attgactcactctgaaatgaactgacaagagacaagagtcaattttcttgagagttaaag 527
Query: 61 gattccaagttgagaattgtccttcatgaacaaatgactcatgtttactttgcatagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gattccaagttgagaattgtccttcatgaacaaatgactcatgtttactttgcatagaaa 467
Query: 121 gtcaccaatcaaaattgcatatgcattatctttagcacagtgagtttcagttcatactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtcaccaatcaaaattgcatatgcattatctttagcacagtgagtttcagttcatactgc 407
Query: 181 cctctctatgtatcagttggctttaccttttaattggatttttatttcatattttccagc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cctctctatgtatcagttggttttaccttttaattggatttttatttcatattttccagc 347
Query: 241 tctagttcccttaggcaaactcatgacctcattctacaattcccaatgttatgttatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tctagttcccttaggcaaactcatgacctcattctacaattcccaatgttatgttatata 287
Query: 301 ataattgtttgcgcaagcaggcttcccaaaaatcagaatttaacttagtactttatagcc 360
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 286 ataattgtttgcgcaagcagggttcccaaaaatcagaatttaacttagtagtttatagcc 227
Query: 361 agaaaatcagttgaaaatataatttg 386
||||||||||||||||||||||||||
Sbjct: 226 agaaaatcagttgaaaatataatttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
