Query= MSMg01no081_o15.b1 MSMg01no081_o15.b1 CHROMAT_FILE:
MSMg01no081_o15.b1 PHD_FILE: MSMg01no081_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:16 2005
(466 letters)
>mm_chr10_67150539_67151404
Length = 866
Score = 596 bits (308), Expect = e-174
Identities = 311/312 (99%)
Strand = Plus / Minus
Query: 155 taaaggccagaaagagggcattggatccaccaggactggagtttcagagagttgtaaagc 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 taaaggccagaaagagggcattggatccaccaggactggagtttcagagagttgtaaagc 807
Query: 215 tgccatataagcactgggaattgagcgctggtcctctgcaagagcagcctgtgctctgaa 274
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tgccatataagcactgagaattgagcgctggtcctctgcaagagcagcctgtgctctgaa 747
Query: 275 ttgttgagccatttgtgcagtgctcctattccctgccagaaagtttttgtttgtgttttg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ttgttgagccatttgtgcagtgctcctattccctgccagaaagtttttgtttgtgttttg 687
Query: 335 ctttgttttgtttcgttttgaaccttttaaaaaatattggcagggtagggggttgaatcc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ctttgttttgtttcgttttgaaccttttaaaaaatattggcagggtagggggttgaatcc 627
Query: 395 aagtcctgagggtgtgtgtgtatgtgtgtgtgcatgcacacacctgcatgcacatgtgga 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aagtcctgagggtgtgtgtgtatgtgtgtgtgcatgcacacacctgcatgcacatgtgga 567
Query: 455 catgtgcacatg 466
||||||||||||
Sbjct: 566 catgtgcacatg 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_o15.g1 MSMg01no081_o15.g1 CHROMAT_FILE:
MSMg01no081_o15.g1 PHD_FILE: MSMg01no081_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:16 2005
(284 letters)
>mm_chr10_67030182_67030865
Length = 684
Score = 474 bits (245), Expect = e-138
Identities = 266/275 (96%), Gaps = 5/275 (1%)
Strand = Plus / Plus
Query: 12 cagatgtaggaacacatcctcacatttagatgg--cccgtaagaaagacctggagaagca 69
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 213 cagatgtaggaacacatcctcacatttagatggat---gtaagaaagacccggagaagca 269
Query: 70 aagccaactgagcaaaaagaatgacgctcaagttatctcatacctggtttcaagaaccat 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagccaactgagcaaaaagaatgacgctcaagttatctcatacctggtttcaagaaccat 329
Query: 130 agcaagagaacatcacacctgtctctcacctgtcccagaaggaccctgggagtttagcca 189
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 agcaagagaacatcacacctgtctctcacctgtcccagaaggaccccgggagtttagccg 389
Query: 190 gccaccctgtagcttctaagattcccccctttgagacttcacccttcacacactctgctc 249
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gccaccctgtagcttctaaggttcccccctttgagacttcacccttcacacactctgctc 449
Query: 250 tcctggttctggttactcccctgggatgacatagt 284
|||||||||||||||||||||||||||||||||||
Sbjct: 450 tcctggttctggttactcccctgggatgacatagt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
