Query= MSMg01no082_d15.b1 MSMg01no082_d15.b1 CHROMAT_FILE:
MSMg01no082_d15.b1 PHD_FILE: MSMg01no082_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:39 2005
(515 letters)
>mm_chr10_115366330_115367244
Length = 915
Score = 965 bits (499), Expect = 0.0
Identities = 511/515 (99%), Gaps = 1/515 (0%)
Strand = Plus / Plus
Query: 1 gtgccatttttttatgtgggtgctatgatttgaattctggtcctcgagattatgcagcaa 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtgccatttttt-atgtgggtgctatgatttgaattctggtcctcgagattatgcagcaa 260
Query: 61 gctctcttggctaatgagccatatcgatgggccctcacaactcttattttgatgtgagta 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctctcttagctaatgagccatatcgatgggccctcacaactcttattttgatgtgagta 320
Query: 121 gtttagaaaataaaactatcaaaacttcaaggtctacagaaaatggagaaacaacaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttagaaaataaaactatcaaaacttcaaggtctacagaaaatggagaaacaacaattt 380
Query: 181 tcgttttgttttaatgtttctgaatttcttcaatgtgttacagcatcgttttggtttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcgttttgttttaatgtttctgaatttcttcaatgtgttacagcatcgttttggtttttg 440
Query: 241 taaacaacatcatcatccagatgctggaagtgagttgaaaaacagatgctcagtggctgc 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaacaacatcatcagccagatgctggaagtgagttgaaaaacagatgctcagtggctgc 500
Query: 301 tactgcacaggctctggctttaaagtagcatctctggagggagggaggtcaacttgaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tactgcacaggctctggctttaaagtagcatctctggagggagggaggtcaacttgaaac 560
Query: 361 aaccagaataataataagaatagtctttaagtgctttgaacccttaaggtgtggtgttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccagaataataataagaatagtctttaagtgctttgaacccttaaggtgtggtgttct 620
Query: 421 ggttcaaagtgtctctagcatctacctagtctgtcatttactaccctagggtgtctagag 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 ggttcaaagtgtctctagcatctacctagtctgtcattcactaccctagggtgtctagag 680
Query: 481 tatttatctgatatttgcagtgaccttagctcagg 515
|||||||||||||||||||||||||||||||||||
Sbjct: 681 tatttatctgatatttgcagtgaccttagctcagg 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_d15.g1 MSMg01no082_d15.g1 CHROMAT_FILE:
MSMg01no082_d15.g1 PHD_FILE: MSMg01no082_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:39 2005
(527 letters)
>mm_chr10_115517215_115518141
Length = 927
Score = 607 bits (314), Expect = e-178
Identities = 341/356 (95%), Gaps = 10/356 (2%)
Strand = Plus / Minus
Query: 182 gtcaggaaggagctcacaaagtctgtctcctagccaaggagctgctggaaatggacgggt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 gtcaggaaggagctcacaaagtctgtctcctagccaaggagctgctggaaatggacgggt 868
Query: 242 gtctggggtagaggcgctcattttggagtgagactatggctgccagtaggttgaccatgt 301
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gtctgggggagaggcgctcattttggagtgagactatggctgccagtaggttgaccatgt 808
Query: 302 gccctatgcccacatggataacagtagcgccaactggacacacacatacacacacacaca 361
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 807 gccctatgcccacatggataacagtagtgccaactggacacacacacacacacacacaca 748
Query: 362 ca----------cacacacagttgaaaggagaaaagataaaatgctaggagtggagacgg 411
|| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 747 catacacacacacacacacagttgaaaggagaaaagataaaatgttaggagtggagacgg 688
Query: 412 aatggagataaaaatcataatatattgtagacttatatgaatctctcaaagaataaatta 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aatggagataaaaatcataatatattgtagacttatatgaatctctcaaagaataaatta 628
Query: 472 aaaacacgttagaaagtacttctaggggttaataaaatcagtttaatagttatgtg 527
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 627 aaaacacgttagaaagtacttctagaggttaataaaatcagtttaatagttatgtg 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
