Query= MSMg01no082_d21.b1 MSMg01no082_d21.b1 CHROMAT_FILE:
MSMg01no082_d21.b1 PHD_FILE: MSMg01no082_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:40 2005
(620 letters)
>mm_chr10_105799817_105800836
Length = 1020
Score = 1087 bits (562), Expect = 0.0
Identities = 598/614 (97%), Gaps = 7/614 (1%)
Strand = Plus / Plus
Query: 6 gaattcaataaaatgatgcctatggtgtattgaaacagaaaaaaaatatatgcaggcata 65
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaataaaatgaaggttatggtgtattgaaacagaaaaaaaatatatgcaggcata 265
Query: 66 atgtttggttgggaatacaagttattttccatgttggaatgaaaatggaatggtgtatga 125
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgtttggttgggaatacaagttgttttccatgttggaatgaaaatggaatggtgtatga 325
Query: 126 agactaagtcaatctgtttgatgattccatttatagccattttcatgggcttgcctttac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agactaagtcaatctgtttgatgattccatttatagccattttcatgggcttgcctttac 385
Query: 186 aatgttccccactgaacgaaatagaaataatatctgttggctatttagtttgctttaaaa 245
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 386 aatgttccccactgaacgaaatagaaataatgtctgttggctatttagtttgctttaaaa 445
Query: 246 tattttagagtagtggaacgaactgcttcataggataagagaaatcttatgaaggcacag 305
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 446 tattttagagtagtggaa-------cttcataggataagagaaaccttatgaaggcacag 498
Query: 306 acctggatgagggcaggttgttgaaagggtatttgggtacaggagaaatttcacaacaga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acctggatgagggcaggttgttgaaagggtatttgggtacaggagaaatttcacaacaga 558
Query: 366 atgtggatgactgggaggatagccgaagacacttctcagaaacagcttatcttatccatt 425
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 559 atgtggatgactgggaggatagccgaagacacttctcagaaacagcttatgttatccatt 618
Query: 426 ccattaattgcaactcttagaagagagtgtattgaataatactggtagtctgtagcaatc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ccattaattgcaactcttagaagagagtgtattgaataatactggtagtctgtagcaatc 678
Query: 486 tgaatggattattaaagattcagttcacagatcacatgaagttcaataagaaggaagacc 545
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 679 tgaatggattattaaagattcagttcatagatcacatgaagttcaataagaaggaagacc 738
Query: 546 aaagtgagggtgcttcagtcattcttagaaagagaacaaaatactcacaggagcaaatat 605
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 739 aaagtgagggtgcttcagtcattcttagaaagagaacaaaatgctcacaggagcaaatat 798
Query: 606 ggagataaagtgta 619
||||||||||||||
Sbjct: 799 ggagataaagtgta 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_d21.g1 MSMg01no082_d21.g1 CHROMAT_FILE:
MSMg01no082_d21.g1 PHD_FILE: MSMg01no082_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:40 2005
(533 letters)
>mm_chr10_105973150_105974082
Length = 933
Score = 723 bits (374), Expect = 0.0
Identities = 383/386 (99%)
Strand = Plus / Minus
Query: 1 attgactcactctgaaatgaactgacaagagacaagagtcaattttcttgagagttaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 attgactcactctgaaatgaactgacaagagacaagagtcaattttcttgagagttaaag 527
Query: 61 gattccaagttgagaattgtccttcatgaacaaatgactcatgtttactttgcatagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gattccaagttgagaattgtccttcatgaacaaatgactcatgtttactttgcatagaaa 467
Query: 121 gtcaccaatcaaaattgcatatgcattatctttagcacagtgagtttcagttcatactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtcaccaatcaaaattgcatatgcattatctttagcacagtgagtttcagttcatactgc 407
Query: 181 cctctctatgtatcagttggttttaccttttaattggatttttatttcatattttccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cctctctatgtatcagttggttttaccttttaattggatttttatttcatattttccagc 347
Query: 241 tctagttcccttatgcaaactcatgacctcattctacaattcccaatgttatgttatata 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tctagttcccttaggcaaactcatgacctcattctacaattcccaatgttatgttatata 287
Query: 301 ataattgtttgcgcaagcagggttcccaaaaatcagaatttaacttaccagtttatagcc 360
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 286 ataattgtttgcgcaagcagggttcccaaaaatcagaatttaacttagtagtttatagcc 227
Query: 361 agaaaatcagttgaaaatataatttg 386
||||||||||||||||||||||||||
Sbjct: 226 agaaaatcagttgaaaatataatttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
