Query= MSMg01no083_i06.b1 MSMg01no083_i06.b1 CHROMAT_FILE:
MSMg01no083_i06.b1 PHD_FILE: MSMg01no083_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:16 2005
(646 letters)
>mm_chr10_92015309_92016354
Length = 1046
Score = 1187 bits (614), Expect = 0.0
Identities = 624/632 (98%), Gaps = 8/632 (1%)
Strand = Plus / Minus
Query: 23 gctaggaggggagcttaaggggtggagtcctggcttaactgatgagagaccactgaaaaa 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 gctaggaggggagcttaaggggtggagtcctggcttaactgatgagagaccactgaaaaa 987
Query: 83 ccatttcagaggtaatatttagttagtgactttttttcaacacaaactcttctggtatct 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 ccatttcagaggtaatatttagttagtgactttttttcaacacaaactcttctggtatct 927
Query: 143 acatgtacatatgtgcctat--------atacatacatacatacatacatacatacatac 194
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 926 acatgtacatatgtgcctatatacatacatacatacatacatacatacatacatacatac 867
Query: 195 atacatacatacatacatactcacacatacttgtgaagaaaggaagtaaaaaatagtact 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 atacatacatacatacatactcacacatacttgtgaagaaaggaagtaaaaaatagtact 807
Query: 255 aatgaaaatcaagtttagacactagaggaagacaatatgacaaatcccactaagccttct 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aatgaaaatcaagtttagacactagaggaagacaatatgacaaatcccactaagccttct 747
Query: 315 aaatcttaagaacaaggtcaagccaaatagcacaagtctattcttaaatgagaagacaag 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aaatcttaagaacaaggtcaagccaaatagcacaagtctattcttaaatgagaagacaag 687
Query: 375 gcattttactgcgagaagtgtttttttctgtagctttagagcaccagagtgaacctaatc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gcattttactgcgagaagtgtttttttctgtagctttagagcaccagagtgaacctaatc 627
Query: 435 atcagtagctcctcagagtaagcaaagtgatggatgactcctaccttgtcagttttggtc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atcagtagctcctcagagtaagcaaagtgatggatgactcctaccttgtcagttttggtc 567
Query: 495 ttctgcttcttgtcatggagagatatggaagagatgctaatttgattagggaaggaaata 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttctgcttcttgtcatggagagatatggaagagatgctaatttgattagggaaggaaata 507
Query: 555 cagaatgtatggctatatgcaatttaagactagataatcagctcttaattgccaaaaatt 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cagaatgtatggctatatgcaatttaagactagataatcagctcttaattgccaaaaatt 447
Query: 615 cactgcagagatagatctgctgtgttggttac 646
||||||||||||||||||||||||||||||||
Sbjct: 446 cactgcagagatagatctgctgtgttggttac 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 16
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_i06.g1 MSMg01no083_i06.g1 CHROMAT_FILE:
MSMg01no083_i06.g1 PHD_FILE: MSMg01no083_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:16 2005
(535 letters)
>mm_chr10_91857470_91858403
Length = 934
Score = 928 bits (480), Expect = 0.0
Identities = 527/564 (93%), Gaps = 36/564 (6%)
Strand = Plus / Plus
Query: 1 caggccagtgagagaccctgtctc-aaaacaaaagaggtagggagcaccggagggttgtc 59
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 178 caggccagtgagagaccctgtctcaaaaacaaaagaggtagggagcacctgagggttgtc 237
Query: 60 ctgtggcctgcatgtgaacacacacacacacacacacacacacacacacacacacacaca 119
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctgtggcctgcatgtga------acacacacacacacacacacacacacacacacacaca 291
Query: 120 cacacacacacacatttgcacaaaaatgcatgtgtacctaaggtgcattcacatgtgcat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cacacacacacacatttgcacaaaaatgcatgtgtacctaaggtgcattcacatgtgcat 351
Query: 180 gcacacacagaactaaaatacatgacactatatacacacatacatacacacacacacaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gcacacacagaactaaaatacatgacactatatacacacatacatacacacacacacaca 411
Query: 240 cacacac----------------------------agagagagagagagagagagagaga 271
||||||| |||||||||||||||||||||||||
Sbjct: 412 cacacacacacacacacacagagagagagagagagagagagagagagagagagagagaga 471
Query: 272 gagagagagaacttaatgcaaaaaaatatcaaaagtatgtaacagaagaaaatggcctac 331
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 472 gagagagagaacttaatgcaaaaaaa-atcaaaagtatgtaacagaagaaaatggcctac 530
Query: 332 tagaaagatgactaaaactcctaaaagttaagggcaagcctaggctaattctgagcagag 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tagaaagatgactaaaactcctaaaagttaagggcaagcctaggctaattctgagcagag 590
Query: 392 tgacactgagaaaacactaacacagggtcatcttggaccctgaacagtcttggaccaaag 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgacactgagaaaacactaacacagggtcatcttggaccctgaacagtcttggaccaaag 650
Query: 452 tagtttgtgatggctggacataaggcagcacattggttttaagtattacatttttaaaac 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tagtttgtgatggctggacataaggcagcacattggttttaagtattacatttttaaaac 710
Query: 512 aaaacaaaacaaagcaaattgaag 535
||||||||||||||||||||||||
Sbjct: 711 aaaacaaaacaaagcaaattgaag 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 185
Number of extensions: 61
Number of successful extensions: 61
Number of sequences better than 10.0: 1
Number of HSP's gapped: 41
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 934
Length adjustment: 10
Effective length of query: 525
Effective length of database: 924
Effective search space: 485100
Effective search space used: 485100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
