Query= MSMg01no084_a21.b1 MSMg01no084_a21.b1 CHROMAT_FILE:
MSMg01no084_a21.b1 PHD_FILE: MSMg01no084_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:58 2005
(497 letters)
>mm_chr10_44893797_44894693
Length = 897
Score = 818 bits (423), Expect = 0.0
Identities = 462/481 (96%), Gaps = 10/481 (2%)
Strand = Plus / Minus
Query: 27 tgaaggccaggaaacaaagttcgattttgcttaggtatttggcaagtcattgcttggagg 86
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tgaaggccaggaagcaaagttcgattttgcttaggtatttggcaagtcattgcttggagg 838
Query: 87 cacctataaaaaaacaatactgaaaggaagcacacagatccattctcaagcacaaatttg 146
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 837 cacctataacaaaacaatactgaaaggaagcacacagatccattcgcaagcacaaatttg 778
Query: 147 gagcatttgttatgaatgccacttgattgacttgtgtccagatggtcagtggactgcatc 206
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 777 gagcatttgttatgaatgccacttgattgacttgtgtccaggtggtcagtggactgcatc 718
Query: 207 cctgtgtcat----------gtacaggatgagatacccaaatcatataaggctgcctagc 256
|||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 717 cctgtgtcatgaatgtttaagtacgggatgagatacccaaatcatataaggctgcctagc 658
Query: 257 aaaaatggcccatcctggaataagatatttccccatccttgtggttctctctaggctgtt 316
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aaatatggcccatcctggaataagatatttccccatccttgtggttctctctaggctgtt 598
Query: 317 ctttggatgggggattttatggccttgttcctggaatttatggtctgtttctggggctcg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 597 ctttggatgggggattttatggccttgttcctggagtttatggtctgtttctggggctgg 538
Query: 377 tgacttatgacctaattcccgggactgatgacttagggaggttttatggtcagttcctgt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgacttatgacctaattcccgggactgatgacttagggaggttttatggtcagttcctgt 478
Query: 437 aatgggtgactttcttttttaagtcaagcctggtcctaaaatggagtttatattgtcctc 496
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 477 aatgggtgactttcttttttaagtcaggcctggtcctaaaatggagtttatattgtcctc 418
Query: 497 t 497
|
Sbjct: 417 t 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_a21.g1 MSMg01no084_a21.g1 CHROMAT_FILE:
MSMg01no084_a21.g1 PHD_FILE: MSMg01no084_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:58 2005
(473 letters)
>mm_chr10_44782795_44783667
Length = 873
Score = 833 bits (431), Expect = 0.0
Identities = 461/471 (97%), Gaps = 2/471 (0%)
Strand = Plus / Plus
Query: 1 cttcctaacaacactaaggga-cagactcttcttttctaatgtgcaaacacctttggagc 59
||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcctaacaacactaa-ggatcagactcttcttttctaatgtgcaaacacctttggagt 259
Query: 60 gtcattagtaataccgtaaagctccaggatcagtcaggatctgcttcctccgcccatatt 119
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 260 gtcattagcaataccgtaaagctccaggatcagtcaggatctgcttcctctgcccatatt 319
Query: 120 tgctatctggattgaattcaaccttgtgccagggacagaacgaggtgagaacctagacat 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 320 tgctatctggattgaattcaaccttgtgccagggatagaacgaggtgagaacctagacat 379
Query: 180 ccacacactgttcatatccctcaaagacaactgaggccgtgtcacaagttcctagtttgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccacacactgttcatatccctcaaagacaactgaggccgtgtcacaagttcctagtttgt 439
Query: 240 tgaatggtctgactagggactacaagccttcacttggcatctgaagtatctatgaaaggt 299
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 tgaatggtcagactagggactacaagccttcacttggcatctgaagtatctatgaaagtt 499
Query: 300 ctaaaatcagagaaaactatgaacatcgctccactggatatatgatcacctccctcactc 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 ctaaaatcagagaaaactatgaacatcgctccactgaatatatgatcacctccctcactc 559
Query: 360 catgatgtatgggcagcgttccagggaaattcacttattctgaatcagttatgaggttcc 419
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 catgatgtatgggcagcgttccagggaaattcacttattctgagtcagttatgaggttcc 619
Query: 420 tacattctgcaagttcccacagagctctcacttagaatatgggtttttttt 470
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tacattctgcaagttcccacagagctctcacttagaatatgggtttttttt 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
