Query= MSMg01no084_c04.b1 MSMg01no084_c04.b1 CHROMAT_FILE:
MSMg01no084_c04.b1 PHD_FILE: MSMg01no084_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:05 2005
(529 letters)
>mm_chr10_96465689_96466617
Length = 929
Score = 986 bits (510), Expect = 0.0
Identities = 522/526 (99%)
Strand = Plus / Plus
Query: 4 ggaattctggatcattgcagaaagctgaggcatgaggagttgaaaatgtagtgagaccac 63
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattctggatcattgtagaaagctgaggcataaggagttgaaaatgtagtgagaccac 263
Query: 64 ccacaggtcatgttggcagaagggtctaaagtctgaatagttcatgctgcctgtctgtat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccacaggtcatgttggcagaagggtctaaagtctgaatagttcatgctgcctgtctgtat 323
Query: 124 agaatttctggaatgtgacacaaagagaacccgatgaaagaaaagatttggggatgagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agaatttctggaatgtgacacaaagagaacccgatgaaagaaaagatttggggatgagaa 383
Query: 184 gatagttccattcgtcaagtggccattgcctaagcataaggatatgagtttagatcctta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatagttccattcgtcaagtggccattgcctaagcataaggatatgagtttagatcctta 443
Query: 244 gccagccacataaaaagtcaggattggtgtaacactccttttcttatccagggttttatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gccagccacataaaaagtcaggattggtgtaacactccttttcttatccagggttttatt 503
Query: 304 gttgagaagagacaccatggccacagcaactcttataaaaaaaataatttaattggggct 363
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 gttgagaagagacaccatggccacagcaactcttataaaagaaataatttaattggggct 563
Query: 364 tgcttaccatttctttggtttaatccaatatcatcacagtggggaacatggcagcataca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgcttaccatttctttggtttaatccaatatcatcacagtggggaacatggcagcataca 623
Query: 424 ggcagacactatactagagtagtagcttaaagctctacctccagattggcagatagcagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggcagacactatactagagtagtagcttaaagctctacctccagattggcagatagcagc 683
Query: 484 aagagtggcacacttcctccagcaaggtcatactccccaatcctca 529
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 aagagtggcacacttcctccagcaaggccatactccccaatcctca 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_c04.g1 MSMg01no084_c04.g1 CHROMAT_FILE:
MSMg01no084_c04.g1 PHD_FILE: MSMg01no084_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:05 2005
(397 letters)
>mm_chr10_96603970_96604767
Length = 798
Score = 739 bits (382), Expect = 0.0
Identities = 394/398 (98%), Gaps = 1/398 (0%)
Strand = Plus / Minus
Query: 1 attaactgtaagtaacaattggcattgtaggttttctttccttttactgaactttggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 attaactgtaagtaacaattggcattgtaggttttctttccttttactgaactttggcag 539
Query: 61 agtagattgaaagtcatgggttaaaataatcccatagcgtccttcccagatgttctccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agtagattgaaagtcatgggttaaaataatcccatagcgtccttcccagatgttctccct 479
Query: 121 cagctgtcacagctctcccatggtcactgcagatgggcttatggatgcctcatgggtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cagctgtcacagctctcccatggtcactgcagatgggcttatggatgcctcatgggtaaa 419
Query: 181 aggatgtgggtgttctaattcagcaatggggccggctcactgcaaatcacaaaagagctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aggatgtgggtgttctaattcagcaatggggccggctcactgcaaatcacaaaagagctc 359
Query: 241 atgacattgaagtgggagtgtggcaggaaatagagagtagggttcaga-tagataaaatc 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 358 atgacattgaagtgggagtgtggcaggaaatagagagtagggttcagattagataaaatc 299
Query: 300 catctataaaaattatgattaaaataagctccaaaagaactcttacaggattctgcaaat 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 298 catctataaaaattatgattaaaataagctccaaaagaactcttacaggattctacaaat 239
Query: 360 cttttgtttcactttctcttttggattttatggctgaa 397
||||||| |||||||| |||||||||||||||||||||
Sbjct: 238 cttttgtctcactttcccttttggattttatggctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 798
Length adjustment: 9
Effective length of query: 388
Effective length of database: 789
Effective search space: 306132
Effective search space used: 306132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
