GCGGCCGCTATACGACTCCTATAGGTTCAGAATCCGCGGAATTCTCCTGC
TTCTTGTCTGTGAGGTTTGTCTAGAGCTCATTCAGATTCAAGATGCACTT
TAAGACAGAGTTAAGGGAGGAACTGAAGAACAGAAGAAAATCTTCTATTT
CAAATTTGCTTATTGAGGTCCAGAGCCACCAGGCTGCTGATATAGATGGA
CATAGATCAGAAAGGAAAATAATATTGTTTGAAGGAGTTTAGACTTCACC
TCTAGGAATAATAAAGGCCTTAGCAGTCAGCACTAGTTGGAAGCTACCCC
CTTTCTGGATTTGTTTCTAAAATATAGTGGGGATTATTATTTCATTGCAA
TCACAGTTTGTCCAACTCTTTGAAGCCTTGGAAAGGGTACTGCAATAGTA
CAGCTATACTCCAGATCCATATTTATGAAAACAATATTTAAAAATTCCTT
GTGTTCATTCACCTAGGAGTTAGCAATGGTATGGCTCTCAACTTGTCTGG
GCCAAGACAGGACAAGGAACTGGTTGGTTACTTTTGTTGTCATGTAGGTT
CAGAGTAAAGAGAGAGTTACTGAACTAGAAAAAACCAACCCAACCCAACC
CAACCCAATCCAAACCAACCCAACCCAAACCAACCCAAACCAAACCAAAC
CAAACCAAATCAAACCAAACCAAACCCAACCAAACCAAACCAAAAGGAAC
TGAATTCCATGGTCATATTATCAGTAGGACATACTCCTCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXACAGCTATGGATAGTGTACAGACAACTTAAACTTCTCTGGTTCTTA
ACTCTCTTGTGTATAAAACAGAATATCTACTGAAAGGTGAACCTTAGGCA
CAGGAGAGCTAAACAAAATTTTCAATTACTTTAAAACTATCTACATTTAA
ACAACTGTTATTTTATTGAAATGTATTAATACATAGTAAATAATAGGAGG
TGTTACTTGTAGCAACTCTGTAATTAACATGCAGACATGACATCAAAATC
CTTTCCAATGTTTCAGGGATATGTTTGCAAATTAATGATTTGTATTTTTG
CCTCAATTTGACAGATTTTCTTTTTTACATCTGGAATATTTGAACCATAA
CCAAAATTCCACACCAATGTTGTAATTTGATTTCATATATTTCTGTAACA
TAGAAAATGCCATTATGTCTTAATATAATGGGAGATTTCAATTTATCAAT
AATTATGTCTTAATTTGCATTCGAAATGTTTAATTTTCACCTTAAAAGAG
CCTGTTTTCATAGAATTTATCTGGTAATAGTCTTCATAATTATTTAAAAG
TTTTATCTCTTTATTATGCAGAATTCACTATGCCAGCAACTTTTCTAACC
TATCTATAAATAATATATATGTATTACTAACATAAAATATACCATTATGA
CTTAGATACCGACTCCTAAAGGGGG

Query= MSMg01no084_j24.b1 MSMg01no084_j24.b1 CHROMAT_FILE:
MSMg01no084_j24.b1 PHD_FILE: MSMg01no084_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:42 2005
         (504 letters)



>mm_chr10_37411789_37412692
          Length = 904

 Score =  953 bits (493), Expect = 0.0
 Identities = 499/501 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctcctgcttcttgtctgtgaggtttgtctagagctcattcagattcaagatgcac 63
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcctgcttcttgtatgtgaggtttgtctagagctcattcagattcaagatgcac 263

                                                                       
Query: 64  tttaagacagagttaagggaggaactgaagaacagaagaaaatcttctatttcaaatttg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttaagacagagttaagggaggaactgaagaacagaagaaaatcttctatttcaaatttg 323

                                                                       
Query: 124 cttattgaggtccagagccaccaggctgctgatatagatggacatagatcagaaaggaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttattgaggtccagagccaccaggctgctgatatagatggacatagatcagaaaggaaa 383

                                                                       
Query: 184 ataatattgtttgaaggagtttagacttcacctctaggaataataaaggccttagcagtc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataatattgtttgaaggagtttagacttcacctctaggaataataaaggccttagcagtc 443

                                                                       
Query: 244 agcactagttggaagctaccccctttctggatttgtttctaaaatatagtggggattatt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agcactagttggaagctaccccctttctggatttgtttctaaaatatagtggggattatt 503

                                                                       
Query: 304 atttcattgcaatcacagtttgtccaactctttgaagccttggaaagggtactgcaatag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atttcattgcaatcacagtttgtccaactctttgaagccttggaaagggtactgcaatag 563

                                                                       
Query: 364 tacagctatactccagatccatatttatgaaaacaatatttaaaaattccttgtgttcat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tacagctatactccagatccatatttatgaaaacaatatttaaaaattccttgtgttcat 623

                                                                       
Query: 424 tcacctaggagttagcaatggtatggctctcaacttgtctgggccaagacaggacaagga 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 tcacctaggagttagcaatggtatggctctcaacttgtctgggccaagacaggaaaagga 683

                                
Query: 484 actggttggttacttttgttg 504
           |||||||||||||||||||||
Sbjct: 684 actggttggttacttttgttg 704


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space:   441636
Effective search space used:   441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no084_j24.g1 MSMg01no084_j24.g1 CHROMAT_FILE:
MSMg01no084_j24.g1 PHD_FILE: MSMg01no084_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:42 2005
         (474 letters)



>mm_chr10_37586414_37587287
          Length = 874

 Score =  901 bits (466), Expect = 0.0
 Identities = 472/474 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagctatggatagtgtacagacaacttaaacttctctggttcttaactctcttgtgtata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cagctatggatagtgtacagacaacttaaacttctctggttcttaactctcttgtgtata 615

                                                                       
Query: 61  aaacagaatatctactgaaaggtgaaccttaggcacaggagagctaaacaaaattttcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaacagaatatctactgaaaggtgaaccttaggcacaggagagctaaacaaaattttcaa 555

                                                                       
Query: 121 ttactttaaaactatctacatttaaacaactgttattttattgaaatgtattaatacata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttactttaaaactatctacatttaaacaactgttattttattgaaatgtattaatacata 495

                                                                       
Query: 181 gtaaataataggaggtgttacttgtagcaactctgtaattaacatgcagacatgacatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 494 gtaaataataggaggtgttacttgtagcaactctgtaattaacatgcaggcatgacatca 435

                                                                       
Query: 241 aaatcctttccaatgtttcagggatatgtttgcaaattaatgatttgtatttttgcctca 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aaatcctttccagtgtttcagggatatgtttgcaaattaatgatttgtatttttgcctca 375

                                                                       
Query: 301 atttgacagattttcttttttacatctggaatatttgaaccataaccaaaattccacacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atttgacagattttcttttttacatctggaatatttgaaccataaccaaaattccacacc 315

                                                                       
Query: 361 aatgttgtaatttgatttcatatatttctgtaacatagaaaatgccattatgtcttaata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aatgttgtaatttgatttcatatatttctgtaacatagaaaatgccattatgtcttaata 255

                                                                 
Query: 421 taatgggagatttcaatttatcaataattatgtcttaatttgcattcgaaatgt 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taatgggagatttcaatttatcaataattatgtcttaatttgcattcgaaatgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)