BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-085A06.T7 (MSMg01no085_a06.b1) | MSMg01-085A06.TJ (MSMg01no085_a06.g1) |
ACC | AG304716 | AG304717 |
length | 1,305 | 1,272 |
length of high quality (start - end) | 208 (117 - 324) | 199 (118 - 316) |
definition | CHROMAT_FILE: MSMg01no085_a06.b1 PHD_FILE: MSMg01no085_a06.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:35:13 2005 | CHROMAT_FILE: MSMg01no085_a06.g1 PHD_FILE: MSMg01no085_a06.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:35:13 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | TATTGGGGCTATAGACTCCTATAGGGAGAGATCCGCGGAATTCCTGTGAA
GAATCAGCCACTTTATGGATTGATCCTAGGAACCTGGAGCCAGTATCTTT
CCTTTATCTTCCCAGGGCTTGTGATACGGCTTCAATTCAGGTGTCTGCTC
TGCAGTAGTATAAGACAATAAAATGTCTGGTGTTTAAGCCACTTTATCTG
TATAAGTTTCTAACAGTAGCCCTGGAAAACTAAAAACATGAACTTTGCAA
AGAATTATGCAGTAAATAAGTTATTCTACTTTGTGGAATTGTTTTGAGGA
TTCTCTTGATTAATATTCATGCTCCATGAACGTTGACTTGTGCAAAAATT
GGCCTTACACGGTTAACCATCCCTTCTATTCCCTGTGCCAATTTTTTTTT
ATGTCATAAATCCTGCCATACGTCCTCATTTGTTAATCACTCCTTGTGTT
TGTTATACTTCTCATTTTACTCTCTTCATATAACTTGTTATCCTATGTTT
CATGACAGTGATTTCTGTGCCACTTTCTTTGTACCCTCTCTATTATTTTA
TTGTTTTTTATTTTTTCTTTTTGATTTTTTCTATTTAAACATTTTTTTTT
TTTTCTTTCTTTTTTCCTTATTTCTATTATTTTCTATCCTATTTCTTTTT
ATATTATTCTTCCTTTCTTTTTTCTTTTTTTTTTCATTTTTTATTTCTTC
TTTTTTCTTCTTTTTTCTTTTCTTTCTTCTTTTTTTTCTATTATTCTTTC
TTTTTTTTTTATTTATTTTCATTCTTCTCTTTTTATTTTTTTTTTATTCC
TTTCCTTTTTCTTTTTTTTTATTCTTTCTTTTTTATTTTCTTCATCTTAT
TTTTTTTTTTCTTTATTTTTTCAATCTTCCTTTTATTTTTTATCTTTTTT
CTTTTTTATTTTTTTTCTTTTCCTTTTTTTTATCTTCATTATATTTTTCT
TTTCTCTTACTTATTTTTTCTTTTTTCTTCTATCTATTTTTTAATATATT
TATTTCTTTTTTTTTTCTTCTCTTTCTTTTACTTTTTATTTTTATCTTTC
TTATTATTCTTTATATCATATTTATATTTTCTATTTTTACATCTTATCTA
ACTTTCATTCTTTTCTATTTTTTTATCCTTCTTCTTTCTTATTATCTTTT
GATTTTTTCTTTCTGTCTTCTATCTTTTATTCTCTTTTATATATATATTC
TATATATCTATTCTTCATTCCTTCTTCATCTTCTTTTTTTCTTTTTATTC
TTCTTTATATTTCTCTTATTTTTCTTTTTCCTCTTTACTACTCTCTTTCT
TATTT
| TTTTTATGAGGTGAGNCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTTTTAACACATTCCTGAACATCTATGTAAGTTG
AAGCAAAAATGTGATTCTAGCATTTCTGAAAAGAAATGTTATTATTTTAC
CTGAAAATCCTATTCATTCTCATTTTCTTAGCCCATGGTATCTCCTTCCT
TAGGTTTAGCTCAGCTTCAGGCAGGAGGGTGGTAGATGTCAATTTAGCAA
GATATTCATTAAGACTGGGCAGCCCCAGGATGCTGCTCCATCTCAGGAGC
AGGGCCTCCCGCCAGGAGAGAACAAACTTCTAGGGGTACCTCAGGGAGAT
AGGGACATCCTCACATGGGCTTTGGTTTTCCAAGCCACTCTTGCCTTTTT
TTGTAGACGGAGAAGAGGATCAGAGAACAGAAGTTCTTTCACAGTTCTTC
TACTCCTGCTCAGGACTTCACCCCTGCTAAAGCAAGACTCGTGTTATACA
GTTACTGAGCTGTTTCAGTTAATTCAACAAGGCAGCCTAGCCATTCTAAT
ATTTCAAATCTATGCCAACACTTAGGCAGTTAAGACGAAAGCTGACCCTA
CCTATGCTGTTCCATGGAAAGGTGATGTTAATTTTTTGCTCTCTTTTTTG
TTAGATCTCTTGCTCCTCATTATTTCCTGTTCATAATCTTTGTTATAGTG
TCCTTTGTACTATATTTATTTCCATAGTATTCTATCTCTTTTTCTGCTTC
TCTTTTTCTCTATCTATTTTTTTTTTCTTCATATTTATTTACTTTTTATT
TTTATTTTTTTTATTTTCTCTTTTTTTTTCCTTTCATTGCCTATCCTTTT
TTTCTTATCCTTTACCATCTTTTTTTTTTTCTATTCTCTTTTTATTTTTT
CCTTATTTCTTTTTTATTTTATCTTCTTTTCTTTTCTATTAATCCTTTCT
TTTATACTTCTTTTTTACCTCTCTTTCTTCTTCTTTCTCTATTCCTTATT
ATTTATCTCATTCTTCCTTTATTTCTTCACTTATACCTTTTAACTCCTCT
TATATCTTTTTACTCTTTTTTCTCTTTTTTTTCTTCTATAACACTTCCTT
CTGTATTCTTTTTATATGAGACTTATGTCATACTTTTATTTTCCTATTCT
ATATTTCTTATTCTTTTCTTTGCTTTCTAGCTTTATTTCCTTCTCTCACA
CTTGACCCTTTTCTTTCTTTATATTCTTGTCTATACTCCAAGATGTACCT
TATTTATATCTTTTCGTCCTTA
|
quality values | Open.Hide. 8 8 6 8 8 8 8 8 8 8 10 8 8 8 8 9 9 8 8 11 12 13 19 22 30 36 36 22 22 12 10 10 22 28 29 32 37 31 34 43 37 47 47 42 36 36 36 36 26 23
10 10 10 22 22 21 19 7 8 8 8 8 8 8 8 9 9 10 15 19 22 15 19 21 23 30 35 36 36 36 57 47 50 50 50 50 50 50 50 36 53 50 50 50 33 33 28 23 23 12
11 9 10 12 12 10 10 12 19 28 13 15 15 16 16 11 19 24 31 37 36 36 36 37 43 46 34 33 28 40 28 29 29 34 34 33 43 43 48 40 37 28 28 29 37 42 37 41 41 41
41 40 37 30 28 28 24 24 36 40 57 57 36 36 23 24 24 11 11 11 24 24 43 30 38 38 42 42 22 19 20 20 21 30 38 43 32 28 29 33 36 43 50 57 57 57 57 57 57 52
52 52 52 52 52 52 52 57 57 44 43 36 33 29 28 21 38 21 19 20 27 38 43 27 29 29 24 28 27 27 27 27 27 29 30 36 36 36 36 36 29 29 33 43 44 36 28 17 23 23
38 38 38 43 43 57 30 30 12 15 8 12 12 17 17 17 32 36 28 16 16 21 18 30 27 43 43 35 35 35 34 32 24 15 13 13 15 26 30 43 43 47 44 44 44 43 42 42 37 32
33 21 21 15 15 15 22 27 41 36 25 25 25 32 36 42 44 25 20 12 12 12 12 12 12 19 24 24 19 12 12 8 8 8 8 13 18 24 29 32 24 21 15 15 12 12 11 12 12 23
16 11 11 15 22 22 21 11 11 11 13 13 12 8 10 6 6 8 10 10 21 21 21 34 30 30 30 37 37 20 20 11 11 12 19 17 23 15 15 13 16 9 16 12 22 25 19 12 8 8
10 8 11 12 12 11 26 16 15 13 13 21 22 15 11 11 10 10 10 10 9 9 9 9 9 10 10 9 13 15 10 8 8 8 8 9 12 12 11 16 16 15 24 24 23 23 20 19 11 12
9 9 10 11 13 19 15 19 12 12 12 11 11 11 10 12 10 8 8 6 7 10 8 8 8 8 10 8 6 6 8 8 8 9 11 9 8 8 6 7 10 8 8 8 8 8 8 8 8 8
8 8 10 13 10 11 8 8 8 10 10 8 8 8 8 8 8 8 9 9 8 8 8 10 12 10 10 8 13 8 11 11 8 8 8 10 9 9 9 9 9 9 8 10 7 7 8 8 8 10
9 9 9 11 11 11 10 10 8 10 12 15 12 10 10 12 10 10 12 11 9 9 9 9 9 9 13 13 11 10 8 8 10 8 8 8 6 8 8 7 7 7 10 10 14 10 10 13 11 10
10 12 14 11 11 12 12 12 11 16 15 12 10 10 13 11 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 10 6 6 8 8 9 8 8 6 6 8 7 9 9 8 8 6 6 6
6 8 8 10 10 8 8 8 8 8 8 8 6 7 10 10 10 11 24 16 13 11 9 9 10 11 12 11 13 13 14 18 11 8 8 8 8 8 10 8 8 8 10 10 15 11 11 11 10 9
9 9 12 12 13 12 13 10 12 7 6 8 8 13 13 8 9 9 15 21 19 19 10 21 13 13 12 9 11 13 19 13 13 13 9 8 8 7 6 8 8 6 6 6 8 8 8 10 13 16
13 13 10 10 13 13 13 8 12 7 9 10 12 15 11 10 10 8 8 6 6 8 8 6 7 8 8 8 7 7 12 12 11 8 8 8 12 12 12 8 8 8 10 17 10 8 8 6 6 8
10 15 8 13 8 8 9 9 9 12 10 10 15 14 14 16 10 10 9 9 9 9 10 13 13 11 11 15 11 8 8 13 13 10 10 10 8 8 10 10 10 10 9 6 8 7 6 8 8 8
8 8 10 8 10 15 21 13 13 10 10 8 10 6 7 8 15 12 14 12 10 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 10 10 11 10 10 10 12 12 13 15 13 11 11 9
13 13 14 13 13 13 8 8 8 10 8 10 10 10 14 10 10 10 13 11 11 10 10 8 8 8 8 10 8 6 6 6 8 8 8 8 8 10 10 9 9 9 9 11 11 8 10 7 7 8
11 15 10 22 11 8 8 8 6 8 8 6 6 8 10 9 9 8 8 8 8 8 8 17 13 11 15 12 18 14 9 9 9 9 9 10 9 10 10 9 9 9 7 10 8 8 8 8 8 10
9 8 8 12 8 8 8 8 14 10 10 10 10 10 15 8 8 8 8 8 8 8 10 14 9 10 10 12 12 10 8 8 8 10 8 10 6 6 8 8 9 8 8 8 8 8 8 8 8 6
6 8 8 8 6 6 8 8 10 8 10 8 8 8 10 8 8 8 8 6 9 9 11 11 11 11 11 9 8 8 8 8 8 8 8 10 8 8 6 6 8 8 8 10 10 8 8 8 6 6
8 6 6 10 8 9 10 11 13 11 11 9 9 9 10 10 9 9 12 16 16 12 8 8 8 8 8 6 6 6 6 8 8 8 8 10 8 9 9 9 8 8 8 8 8 9 15 18 13 10
10 9 9 10 10 15 10 10 10 10 10 8 15 9 6 8 6 8 8 8 9 10 10 11 11 8 8 8 8 8 8 9 10 10 12 15 14 8 8 8 6 6 6 8 10 10 8 10 6 7
8 8 8 8 11 18 10 8 8 8 8 8 9 10 8 10 7 7 8 8 10 10 11 11 8 8 8 8 6 6 8 8 10 10 11 8 9 9 10 10 8 8 8 8 8 8 8 8 8 10
8 8 6 7 13 7 8 8 8 8 8 8 10 14 13 13 11 11 13 21 18 10 10 9 9 14 12 17 9 8 8 8 8 9 12 11 11 11 8 10 8 8 8 8 9 10 8 8 8 8
13 10 10 11 8 | Open.Hide. 6 6 7 8 8 11 9 9 9 9 9 10 10 8 3 0 3 6 6 6 7 9 9 10 9 8 10 8 8 9 8 11 11 17 8 9 11 22 21 29 28 28 35 21 21 12 14 15 27 21
38 34 33 39 46 46 59 59 59 59 59 47 27 27 9 9 9 9 8 10 10 8 8 8 8 8 8 10 13 20 30 25 37 33 33 33 53 53 53 53 38 38 38 38 36 50 53 53 50 50
50 50 47 29 27 12 9 11 11 11 12 12 12 11 11 19 14 25 22 22 28 32 32 39 39 39 43 47 57 59 59 59 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 54 50 47
47 57 57 57 59 59 48 57 54 54 57 57 57 57 57 57 57 57 50 50 50 50 50 50 57 57 57 57 57 57 57 43 44 57 57 57 57 57 57 57 44 50 57 57 57 57 57 57 57 44
44 44 68 57 57 52 57 52 57 57 57 57 52 52 52 52 57 57 57 52 52 52 52 52 59 59 59 59 57 52 52 52 57 57 59 59 59 59 59 59 59 59 57 57 57 57 39 39 43 43
59 59 68 68 57 57 52 52 52 57 42 35 35 42 57 57 57 57 52 43 43 43 35 42 43 43 36 36 17 17 28 38 43 54 57 57 52 52 52 43 43 43 38 41 38 38 52 52 52 52
52 52 44 41 29 33 43 44 43 50 43 36 32 27 15 15 26 26 13 18 18 27 27 20 20 20 27 28 44 44 48 44 42 42 31 31 31 42 42 43 36 40 32 28 24 19 15 21 17 32
24 32 32 54 54 44 44 43 43 43 43 28 28 13 12 12 27 18 28 28 40 40 57 48 48 48 43 26 19 12 8 8 19 23 48 48 57 57 59 59 59 47 43 39 39 39 27 22 13 11
8 7 7 9 9 10 10 12 11 23 19 28 28 23 23 25 28 32 37 32 28 23 28 28 23 22 12 12 12 15 15 28 32 39 43 48 42 42 25 24 11 11 11 23 23 23 31 36 32 32
19 15 12 12 12 12 24 23 25 11 15 11 12 12 18 30 37 44 33 33 33 42 37 41 41 28 28 24 24 23 30 25 28 25 25 28 22 22 28 36 31 28 28 35 32 40 24 23 14 14
19 19 19 29 29 19 19 21 13 13 18 28 23 28 12 12 9 12 18 15 12 14 21 16 11 11 15 19 20 24 19 19 10 10 8 8 8 10 11 11 11 10 10 10 15 14 18 19 13 13
13 18 25 18 11 11 10 10 17 17 18 15 21 23 23 20 15 15 14 12 12 12 15 10 10 10 10 10 9 9 9 9 9 11 12 12 12 15 16 16 11 11 11 11 11 12 19 19 23 20
20 23 30 26 29 31 29 18 14 13 15 10 10 11 12 12 12 12 19 19 21 22 11 12 9 13 8 9 12 11 12 9 10 10 19 19 37 18 17 9 9 9 12 12 12 11 11 11 15 11
11 11 11 11 11 16 18 15 8 8 6 6 6 6 8 8 8 8 8 8 10 16 10 10 8 8 8 8 10 10 10 9 9 9 9 8 10 7 6 8 8 10 11 8 8 8 8 10 10 9
8 8 6 6 8 8 10 8 8 8 8 8 8 12 16 16 11 11 10 10 8 10 8 8 8 8 6 6 8 8 9 8 8 8 8 8 8 7 7 8 8 10 8 9 8 8 8 8 8 8
8 8 8 8 8 11 12 16 9 8 8 8 6 6 8 8 10 10 10 8 8 8 8 8 8 8 15 13 12 8 6 6 8 10 10 10 10 11 8 10 8 8 8 8 11 10 10 8 8 10
10 8 8 8 8 10 11 10 10 8 10 10 12 11 10 8 8 8 8 8 9 16 11 11 11 15 21 18 8 8 8 8 8 8 8 8 8 8 8 11 8 8 8 8 8 8 8 10 8 8
8 10 10 10 10 8 8 8 8 8 8 8 8 8 8 6 6 8 10 10 14 17 16 19 15 10 10 10 10 8 8 6 6 8 8 8 8 10 8 8 8 8 8 8 10 10 13 15 19 12
12 13 10 9 9 9 13 9 9 11 11 12 12 10 9 9 8 8 12 8 8 10 8 8 8 8 10 11 8 8 6 6 8 8 9 11 12 11 8 8 8 8 8 11 11 11 11 13 16 10
10 10 8 8 7 7 8 10 10 10 10 12 11 16 11 9 7 7 8 8 8 8 10 8 8 10 10 10 8 8 8 8 15 13 14 20 16 10 10 9 9 8 8 7 7 11 11 12 12 10
10 8 8 6 6 8 10 8 8 8 10 8 10 10 10 9 9 9 13 10 10 11 9 10 8 8 6 6 8 8 8 8 8 8 8 8 7 6 8 8 12 9 9 8 8 8 8 8 8 8
8 8 8 8 8 8 8 15 13 11 11 11 11 11 11 12 15 12 8 8 7 7 8 10 10 8 8 8 8 11 10 12 10 10 8 8 6 6 6 6 8 8 8 8 8 8 8 8 7 10
8 6 6 6 7 8 8 11 9 9 9 11 11 10 8 8 7 7 7 6 8 8 8 8 8 6 6 8 6 6 8 8 10 9 10 8 8 8 8 10 10 10 10 10 10 13 11 11 10 8
8 8 8 8 8 6 6 8 8 8 8 10 9 7 10 8 10 9 10 8 8 7 7 8 13 12 9 8 8 6 6 8 8 8 8 8 8 8 9 12 9 8 8 8 10 8 8 8 8 10
7 6 8 8 6 6 11 8 11 8 8 7 7 10 8 8 10 10 8 8 7 6 6 6 8 8 8 6 6 8 8 8 6 6 6 6 8 8 9 11 9 9 9 8 8 8 7 7 8 8
8 8 8 8 8 6 8 6 6 8 8 9 9 9 9 7 6 8 8 8 6 6 |