Query= MSMg01no085_j10.b1 MSMg01no085_j10.b1 CHROMAT_FILE:
MSMg01no085_j10.b1 PHD_FILE: MSMg01no085_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:33 2005
(425 letters)
>mm_chr10_92759327_92760151
Length = 825
Score = 746 bits (386), Expect = 0.0
Identities = 413/422 (97%)
Strand = Plus / Minus
Query: 2 cccagctactcagaaggctgtgacaggtacaaacttgaaccttgcaagttcaaggtcaac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cccagctactcagaaggctgtgacaggtacaaacttgaaccttgcaagttcaaggtcaac 500
Query: 62 tcagagtctgtagagaattcaggatcagcctgcaccttactcagattttgactcaaaaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tcagagtctgtagagaattcaggatcagcctgcaccttactcagattttgactcaaaaat 440
Query: 122 ttaaaaagtgaacagagctatcaacagttgttggtccagtgcgactcctagattcaatac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttaaaaagtgaacagagctatcaacagttgttggtccagtgcgactcctagattcaatac 380
Query: 182 cccattaaaccacaacaacaacaaaaatcctcttgggtgaaactggcatgtctgtctttc 241
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccattaaacaacaacaacaacaaaaatcctcttgggtgaaactggcatgtctgtctttc 320
Query: 242 tctctgtctctctatccctcgccatcaataatcaatctgtctgtctgtccatttctaccc 301
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 tctctgtctctctatccctcgccatcaataatcaatctgtctgtctgtctatttctacct 260
Query: 302 ctgttcactgagggaactggccaaaagaaatgtggcaaaatgtcttgtactaatttaacc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctgttcactgagggaactggccaaaagaaatgtggcaaaatgtcttgtactaatttaatt 200
Query: 362 caatttcagttttcgagataggatctctgtgtagcataggctgtcccacaactcactctg 421
||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 199 taattttagtttttgagataggatctctgtgtagcataggctgtcccagaactcactctg 140
Query: 422 ta 423
||
Sbjct: 139 ta 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_j10.g1 MSMg01no085_j10.g1 CHROMAT_FILE:
MSMg01no085_j10.g1 PHD_FILE: MSMg01no085_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:33 2005
(320 letters)
>mm_chr10_92672121_92672839
Length = 719
Score = 572 bits (296), Expect = e-168
Identities = 314/320 (98%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 1 caataatggctgactccagcttgcttattcctgtgctagaaattccgaccaacatgtttg 60
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 201 caataatggctgactccagcttgcttattcttgtgctagaaattctgaccaacatgtttg 260
Query: 61 ccagtgatgtttagagataaaagaggcacggtgtccaccatggtaggtggtttttggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagtgatgtttagagataaaagaggcacggtgtccaccatggtaggtggtttttggagc 320
Query: 121 acattcctctgagtatttgattaccagacaaacgcttttattaaaactgagtaatggatg 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 acattcctctgagtatttgattaccagacaaacgtttttattaaaactgagtaatggatg 380
Query: 181 atacactgacattttagaactaattaacaatttagttctaattggatgttttctggaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacactgacattttagaactaattaacaatttagttctaattggatgttttctggaata 440
Query: 241 ttttggtaattatcttaaaacatggttagtttataacacatggtgagatcgtcaaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 441 ttttggtaattatcttaaaacatggttagtttataacacatggtgagat-gttaaaaata 499
Query: 301 tccactattctgaaaatagt 320
||||||||| ||||||||||
Sbjct: 500 tccactattttgaaaatagt 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
