ATTGGGCGCTAXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTAC
CAGTGAAAGACCCTTCTGTGCTTTTAACTCTTTCTCCCCATTTCACTCCT
TCCATGAGCCAGTGCTAGTTCAACTTGGTTTTTAAAATGTCACAACGAAG
TGTTTTCCATTGTCAGTGAAGGTCAGGCACTAGTGTCCCCAAATAACATA
GTAAAGAAACAACTGGTTTTGAATCTTTACACCCCTCTTGGTAAACAGTA
AATGACATTGCCTAGGTAGAGTAATTATTTTTGACTAATAATAAAGATCA
CTGTAGAGAAGTTTTCATCCAACAACGTGGCTACTCTGCCTAGGGATCAC
ATACAAAGATATGATGTGGCTGGAATGCAGACAAGCTTTGTTTTTCAGTA
TGATGTGGCTGCACTGTAGTCAAGCCCTAGTACACACCTTTAATCCCTAA
CAATGAAAGTAAGGTTAGTTTGCATAAGGAAAGAGCCAAGTTGGAAAGTA
ACATCTAATTGAAGGTTAGACAAAGTGACAAATCATAGAAAGATTTGAAA
GAATGATTTGTATATGTGATATGTCTAATTCACACTATAATGCTACAGAA
TCTCCTTAAGAATAACCATAGAGAATAATACGTTATTGTTGTGCTCTGTT
TTTTTCTGTTTATTTCTTATCTTTTTCCTCTCTTTTTTTCTTCTTAATTT
CCTTTATTCTCTTTTTTTTTTTTTTTTTTCTTTCCTTTTTACCCTTTTTT
TTCTTCTCATTTTTTTCATTCTTTTTTCTTTTATTCTTTTTCTTTTTTCT
TTTCATCTCTTTTTTCATCTCTTTCTTCTTTCCTCTATTACTTTTATTCT
ATTTTCTTTTTTATTTTCTTTTTTTCCTTCTTTTCTATCTTTCTCTTTTT
TCTTTTTTTATTTTTCATTTCTCCTTTTTTCACTTCTTTTTCTCTTATTT
TTTATACTTTCTTTTCTTTGTCTTTTTTTTCATTTCCCTTTTCTATTTTT
CTTTATTACTCTTTCTTTCATTTTTTTCTCTTCTTTATTCTCTTTTTTCT
TCTTTTTTTTTTTCTCTTTTTTCTTTTCTATTTCTTTTTTTCTCTTTTCC
TCCCTTTTACTTTCGTCTTTTTTTTTTCTTCTTCTTTTCTATCCTCTTTT
CTTATTCTCTCTACTATACTCACTTTTTTCTCTCAGAGTTTTT

TTTTTTAAGACGTGAGGCTGGGGCCXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCCTTTTTGGAAAGAACAATGTCATCCAAAATA
TGATCTTGCCCTAGTGAAGTTAAATCTTGTGGGTTTCTATAGGCAAATAC
ATAATATTATTTGGAAAATTTTAACGCATCATGGTTACAATAGTCTTCTT
TAAAAAGGAGAGAAATAATAGCAACACAGACTATTCTCTTACCTAGAAAA
TATCGCATATTGAAAAATATCAAATTAAAAGGGAATTAGCATGCATACCT
ATTTGCATATATAAATATTGAGGCTCCAATTAGACAACAAGCTGTGGCTG
TGAGATGAAAATTAAATAAAGCATGGGAGAGGAGAAGGGGAAAGATCATA
ATTATCAAGCAAAGTCCTGGCAAATCCAAAGAGAAGCAATGCCTCAGCAG
GAGGCAAAGGCTCAAAAAATGACACAGAAAACTCAAAACAGTATCATGGA
CGCAATACAGTTTACTCTGCTTTATCTATCACCGAGGCATACAGCATAAA
ACTCAAAAGAAACCAGGAAGCCAATACACTAAGCTTCAAATGTGCTTTAT
TTTCATACATGGGTTCTAGAAGTATTGTCAGAATATGGGCAGATGTCTCA
GTTGATATAAGCTCTTGCCATACATGCTCCGGTATCTGAGTCTAATTCTC
TGTTAGTCTCACTTATATCTCCCTACCTGATCTTGTATTCCCTTGAAGTC
GTTTCAAAGTCTTCTATTCCTCATCTGCTTTTATTTTTCTGTATCTCACT
CATATTATTCTCCTTCTTGACTCTGCATTCTCCATAATTTTTTCCTATTT
CTTATACTCAACTTTCCTTCTCTTTATATCCCTTCCCTTATTAATTCTTT
CTTCGATATTTTCTTCTGTTTCATTTGCCTTTTTCTTCTTTTCTTCTCCT
CCTTTTATTTTTTATTATTCTCTTCATTCTTCTTCTTCCTTGTTCTTCCC
CTCTTTTCTCTCTTCTTTTATTTTTTTGATTCCTTCTTCGTTTTTATATT
TTCATCTTTCCTTTTTATACCCCCCCCCTTCTTTTTTTTTTATTATTTCT
TTATTTACTACCTTACCTCTCCTTTCTCTTTTTTTTGTCTTCATTTTACT
TCTCCATTCTTTTTCATATGATTTGTTCCCATCTTTCTTTTCTTATACTC
TTTATTCTACTTCCTTTTCTTTATATTCTTCTATCTTTC

Query= MSMg01no085_l02.b1 MSMg01no085_l02.b1 CHROMAT_FILE:
MSMg01no085_l02.b1 PHD_FILE: MSMg01no085_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:48 2005
         (322 letters)



>mm_chr10_122847313_122848034
          Length = 722

 Score =  590 bits (305), Expect = e-173
 Identities = 317/321 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcttttaactctttctccccatttcactccttccatgagccagtgctagttcaacttggt 60
           ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 201 gcttttaactctttctccccatttcactccttaaatgagccagtgctagttcaacttggt 260

                                                                       
Query: 61  ttttaaaatgtcacaacgaagtgttttccattgtcagtgaaggtcaggcactagtgtccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaaaatgtcacaacgaagtgttttccattgtcagtgaaggtcaggcactagtgtccc 320

                                                                       
Query: 121 caaataacatagtaaagaaacaactggttttgaatctttacacccctcttggtaaacagt 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaataacacagtaaagaaacaactggttttgaatctttacacccctcttggtaaacagt 380

                                                                       
Query: 181 aaatgacattgcctaggtagagtaattatttttgactaataataaagatcactgtagaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgacattgcctaggtagagtaattatttttgactaataataaagatcactgtagaga 440

                                                                       
Query: 241 agttttcatccaacaacgtggctactctgcctagggatcacatacaaagatatgatgtgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 agttttcatccaacaacgtggctactctgcctagggatcacatacaaagatatgacgtgg 500

                                
Query: 301 ctggaatgcagacaagctttg 321
           |||||||||||||||||||||
Sbjct: 501 ctggaatgcagacaagctttg 521


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space:   223169
Effective search space used:   223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no085_l02.g1 MSMg01no085_l02.g1 CHROMAT_FILE:
MSMg01no085_l02.g1 PHD_FILE: MSMg01no085_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:48 2005
         (407 letters)



>mm_chr10_122952334_122953140
          Length = 807

 Score =  745 bits (385), Expect = 0.0
 Identities = 397/401 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   ttggaaagaacaatgtcatccaaaatatgatcttgccctagtgaagttaaatcttgtggg 65
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 606 ttggaaagaacaatgtcatccaaaatatgatcttgccatagtgaagttaaatcttgtggg 547

                                                                       
Query: 66  tttctataggcaaatacataatattatttggaaaattttaacgcatcatggttacaatag 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tttctataggcaaatacataatattatttggaaaattttaacgcatcatggttacaatag 487

                                                                       
Query: 126 tcttctttaaaaaggagagaaataatagcaacacagactattctcttacctagaaaatat 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tcttctttaaaaaggagagaaataatagcaacacagactattctcttacctagaaaatat 427

                                                                       
Query: 186 cgcatattgaaaaatatcaaattaaaagggaattagcatgcatacctatttgcatatata 245
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cggatattgaaaaatatcaaattaaaagggaattagcatgcatacctatttgcatatata 367

                                                                       
Query: 246 aatattgaggctccaattagacaacaagctgtggctgtgagatgaaaattaaataaagca 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aatattgaggctccaattagacaacaagctgtggctgtgagatgaaaattaaataaagca 307

                                                                       
Query: 306 tgggagaggagaaggggaaagatcataattatcaagcaaagtcctggcaaatccaaagag 365
           |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 306 tgggagaggagaaggggaaagatcataactaacaagcaaagtcctggcaaatccaaagag 247

                                                    
Query: 366 aagcaatgcctcagcaggaggcaaaggctcaaaaaatgaca 406
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aagcaatgcctcagcaggaggcaaaggctcaaaaaatgaca 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space:   317604
Effective search space used:   317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)