Query= MSMg01no085_l09.b1 MSMg01no085_l09.b1 CHROMAT_FILE:
MSMg01no085_l09.b1 PHD_FILE: MSMg01no085_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:50 2005
(323 letters)
>mm_chr10_6220181_6220903
Length = 723
Score = 449 bits (232), Expect = e-130
Identities = 303/350 (86%), Gaps = 41/350 (11%)
Strand = Plus / Minus
Query: 1 gaaaaatccaagaatgagaagagcctaatacttggcagaaaaagtccaactgcagagtcg 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 449 gaaaaatccaagaatgagaagagcctaatacttggcagaaaacgtccaactgcagagttg 390
Query: 61 tgtcctgaaactctgtcttctctaacaaagctggcttccaaagaaagtcacatcgtatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgtcctgaaactctgtcttctctaacaaagctggcttccaaagaaagtcacatcgtatgt 330
Query: 121 gataaatttgaaatgttccctctatgacatcttttaaattcctgagaaatatccaacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gataaatttgaaatgttccctctatgacatcttttaaattcctgagaaatatccaacttt 270
Query: 181 gagatggaaacctttctttttcctatttagcaaagattggtttaagattcactattatcc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 269 gagatggaaacctttctttttccaatttagcaaagattggtttaagattcactattatcc 210
Query: 241 tgcg----------------------cccccccaccccccacccccgtcccgtccttttt 278
||| ||||||| |||||| ||||| |||||||
Sbjct: 209 cgcgtccccgtccccgtcccgtgtcccccccccccccccccccccc--cccgtcc----- 157
Query: 279 ttttt-----agaaaaaacaaacttttaatcattaatataagtgattgcc 323
|||||||| ||||||||||| |||||||||||||||||||
Sbjct: 156 -----cggggagaaaaaa-aaacttttaat-attaatataagtgattgcc 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_l09.g1 MSMg01no085_l09.g1 CHROMAT_FILE:
MSMg01no085_l09.g1 PHD_FILE: MSMg01no085_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:50 2005
(220 letters)
>mm_chr10_6047280_6047898
Length = 619
Score = 362 bits (187), Expect = e-104
Identities = 205/211 (97%), Gaps = 3/211 (1%)
Strand = Plus / Plus
Query: 1 tttgataactagggttttgtgaaagatacatgacactcaaacacagtgcacccccaggca 60
||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 201 tttgataactagggttttgtgaaagatacatgaga-tcaaacacagtgtacccccaggca 259
Query: 61 aggccaaaatgacaaaccgtttgatgggaatcactgtcgagacagtacctgtctgagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggccaaaatgacaaaccgtttgatgggaatcactgtcgagacagtacctgtctgagttt 319
Query: 121 cacttttgttgccatgataaaagaccctggcaaaaagcagcct-gggagggaagggctta 179
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||
Sbjct: 320 cacttttgttgccatgataaaagaccctggcaaaaagcagcctaggg-gggaagggttta 378
Query: 180 tttcagttaaagccaggtcttagtccaccac 210
|||||||||||||||||||||||||||||||
Sbjct: 379 tttcagttaaagccaggtcttagtccaccac 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 619
Length adjustment: 9
Effective length of query: 211
Effective length of database: 610
Effective search space: 128710
Effective search space used: 128710
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
